Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BAALB65_RS09570 Genome accession   NZ_CP029069
Coordinates   1907153..1907773 (-) Length   206 a.a.
NCBI ID   WP_007611720.1    Uniprot ID   A0AAI8HP04
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1902153..1912773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS09545 (BAALB65_09545) - 1903116..1903550 (+) 435 WP_003154017.1 dUTP diphosphatase -
  BAALB65_RS09550 (BAALB65_09550) - 1903859..1904683 (+) 825 WP_022553288.1 poly-gamma-glutamate hydrolase family protein -
  BAALB65_RS20305 - 1904789..1904938 (+) 150 WP_014418013.1 hypothetical protein -
  BAALB65_RS09555 (BAALB65_09555) - 1904925..1905755 (+) 831 WP_109566970.1 prohibitin family protein -
  BAALB65_RS09560 (BAALB65_09560) - 1905783..1906232 (-) 450 WP_017417873.1 YndM family protein -
  BAALB65_RS09565 (BAALB65_09565) - 1906386..1906814 (+) 429 WP_038461485.1 hypothetical protein -
  BAALB65_RS09570 (BAALB65_09570) dinR/lexA 1907153..1907773 (-) 621 WP_007611720.1 transcriptional repressor LexA Regulator
  BAALB65_RS09575 (BAALB65_09575) yneA 1907929..1908240 (+) 312 WP_003154001.1 cell division suppressor protein YneA -
  BAALB65_RS09580 (BAALB65_09580) - 1908256..1908906 (+) 651 WP_021493418.1 recombinase family protein -
  BAALB65_RS09585 (BAALB65_09585) - 1908975..1909208 (+) 234 WP_003153997.1 DUF896 domain-containing protein -
  BAALB65_RS09590 (BAALB65_09590) recP/tkt 1909375..1911378 (+) 2004 WP_109566971.1 transketolase Machinery gene
  BAALB65_RS09595 (BAALB65_09595) sirA 1911530..1911976 (+) 447 WP_003153995.1 sporulation inhibitor of replication protein SirA -
  BAALB65_RS09600 (BAALB65_09600) - 1912062..1912280 (+) 219 WP_003153994.1 YneF family protein -
  BAALB65_RS09605 (BAALB65_09605) - 1912354..1912527 (-) 174 WP_012117647.1 aspartyl-phosphate phosphatase Spo0E family protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23046.64 Da        Isoelectric Point: 5.1645

>NTDB_id=250094 BAALB65_RS09570 WP_007611720.1 1907153..1907773(-) (dinR/lexA) [Bacillus amyloliquefaciens strain ALB65]
MTKLSKRQLDILRFIKEEVKTKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEVLDEEEVQIPKSQ
VVNVPVIGKVTAGIPITAVENIDEYFPLPDRMVPPGEHVFMLEIMGESMIDAGIFDKDYVIVKQQNTANNGEIVVAMTED
DEATVKRFYKEDNYVRLQPENPTMEPIILQNVSILGKVIGVFRAVH

Nucleotide


Download         Length: 621 bp        

>NTDB_id=250094 BAALB65_RS09570 WP_007611720.1 1907153..1907773(-) (dinR/lexA) [Bacillus amyloliquefaciens strain ALB65]
ATGACGAAGCTATCAAAAAGGCAGCTTGATATCCTGCGTTTTATTAAAGAAGAGGTAAAAACGAAAGGATATCCGCCTTC
TGTAAGAGAGATAGGAGAAGCAGTAGGACTGGCTTCCAGTTCAACCGTGCACGGCCATTTGGCGCGGCTGGAGACAAAAG
GCCTGATCAGACGGGACCCTACTAAACCGAGAGCGATTGAGGTATTGGATGAAGAAGAAGTCCAAATTCCGAAAAGCCAG
GTCGTAAACGTTCCGGTCATCGGGAAAGTGACGGCGGGTATTCCGATTACGGCTGTTGAAAATATCGACGAGTATTTTCC
GCTTCCTGACCGGATGGTTCCTCCGGGCGAACATGTCTTTATGTTAGAAATCATGGGAGAAAGTATGATTGACGCCGGCA
TTTTTGACAAAGATTACGTCATCGTCAAACAGCAGAACACGGCCAATAACGGAGAAATCGTCGTAGCTATGACCGAAGAT
GATGAAGCGACGGTTAAGCGCTTCTATAAAGAAGACAATTATGTGCGGCTGCAGCCGGAAAATCCGACGATGGAGCCGAT
TATCCTGCAAAACGTAAGCATTTTGGGGAAAGTTATCGGCGTATTCAGAGCCGTACATTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(85-199)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAI8HP04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

92.718

100

0.927