Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CRD75_RS02340 Genome accession   NZ_CP023769
Coordinates   432706..433515 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain HarveyGAS     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 427706..438515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CRD75_RS02320 (CRD75_02320) - 428148..429395 (+) 1248 WP_011284594.1 AMP-binding protein -
  CRD75_RS02325 (CRD75_02325) - 429451..430485 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  CRD75_RS02330 (CRD75_02330) vicR 430647..431357 (+) 711 WP_002985645.1 response regulator YycF Regulator
  CRD75_RS02335 (CRD75_02335) vicK 431350..432702 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CRD75_RS02340 (CRD75_02340) vicX 432706..433515 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  CRD75_RS02345 (CRD75_02345) rnc 433948..434640 (+) 693 WP_011284596.1 ribonuclease III -
  CRD75_RS02350 (CRD75_02350) smc 434641..438180 (+) 3540 WP_011284597.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=249832 CRD75_RS02340 WP_002985641.1 432706..433515(+) (vicX) [Streptococcus pyogenes strain HarveyGAS]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=249832 CRD75_RS02340 WP_002985641.1 432706..433515(+) (vicX) [Streptococcus pyogenes strain HarveyGAS]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment