Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CQJ38_RS07130 Genome accession   NZ_CP023748
Coordinates   1349184..1349648 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain LABIM40     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344184..1354648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQJ38_RS07105 (CQJ38_07105) - 1344665..1346485 (+) 1821 WP_098081369.1 PAS domain-containing protein -
  CQJ38_RS07110 (CQJ38_07110) - 1346466..1347679 (-) 1214 Protein_1341 aminotransferase A -
  CQJ38_RS20075 (CQJ38_07115) - 1347880..1348041 (-) 162 WP_007409608.1 hypothetical protein -
  CQJ38_RS07125 (CQJ38_07125) cheV 1348230..1349141 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  CQJ38_RS07130 (CQJ38_07130) kre 1349184..1349648 (-) 465 WP_003154622.1 YkyB family protein Regulator
  CQJ38_RS07135 (CQJ38_07135) - 1349771..1351063 (-) 1293 WP_015239757.1 MFS transporter -
  CQJ38_RS07140 (CQJ38_07140) - 1351139..1351633 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  CQJ38_RS07145 (CQJ38_07145) - 1351708..1352571 (-) 864 WP_060561757.1 metallophosphoesterase -
  CQJ38_RS07150 (CQJ38_07150) fadH 1352716..1353480 (+) 765 WP_060561756.1 2,4-dienoyl-CoA reductase -
  CQJ38_RS07155 (CQJ38_07155) - 1353645..1354096 (+) 452 Protein_1349 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=249680 CQJ38_RS07130 WP_003154622.1 1349184..1349648(-) (kre) [Bacillus velezensis strain LABIM40]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=249680 CQJ38_RS07130 WP_003154622.1 1349184..1349648(-) (kre) [Bacillus velezensis strain LABIM40]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGATGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment