Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CQJ38_RS05680 Genome accession   NZ_CP023748
Coordinates   1094366..1095022 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain LABIM40     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1089366..1100022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQJ38_RS05655 (CQJ38_05655) oppF 1089895..1090812 (+) 918 WP_015239568.1 oligopeptide ABC transporter ATP-binding protein OppF -
  CQJ38_RS05660 (CQJ38_05660) - 1090919..1092106 (+) 1188 WP_098081292.1 putative glycoside hydrolase -
  CQJ38_RS05665 (CQJ38_05665) - 1092224..1092802 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  CQJ38_RS05670 (CQJ38_05670) spx 1092981..1093376 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  CQJ38_RS05675 (CQJ38_05675) - 1093434..1094090 (-) 657 WP_015417213.1 TerC family protein -
  CQJ38_RS05680 (CQJ38_05680) mecA 1094366..1095022 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  CQJ38_RS05685 (CQJ38_05685) - 1095173..1096333 (+) 1161 WP_098081293.1 competence protein CoiA family protein -
  CQJ38_RS05690 (CQJ38_05690) pepF 1096561..1098390 (+) 1830 WP_007409107.1 oligoendopeptidase F Regulator
  CQJ38_RS20045 (CQJ38_05695) - 1098428..1098595 (-) 168 WP_003155026.1 hypothetical protein -
  CQJ38_RS05700 (CQJ38_05700) spxH 1098881..1099783 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=249675 CQJ38_RS05680 WP_003155032.1 1094366..1095022(+) (mecA) [Bacillus velezensis strain LABIM40]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=249675 CQJ38_RS05680 WP_003155032.1 1094366..1095022(+) (mecA) [Bacillus velezensis strain LABIM40]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTACATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment