Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | CPQ91_RS13230 | Genome accession | NZ_CP023729 |
| Coordinates | 2538351..2539385 (-) | Length | 344 a.a. |
| NCBI ID | WP_011198115.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain ATCC 9789 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2533351..2544385
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPQ91_RS13180 (CPQ91_13180) | tasA | 2533426..2534220 (-) | 795 | WP_003183447.1 | biofilm matrix protein TasA | - |
| CPQ91_RS13185 (CPQ91_13185) | sipW | 2534294..2534878 (-) | 585 | WP_003183449.1 | signal peptidase I SipW | - |
| CPQ91_RS13190 (CPQ91_13190) | tapA | 2534875..2535603 (-) | 729 | WP_061578399.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CPQ91_RS13195 (CPQ91_13195) | - | 2535880..2536200 (+) | 321 | WP_003183454.1 | YqzG/YhdC family protein | - |
| CPQ91_RS13200 (CPQ91_13200) | - | 2536224..2536406 (-) | 183 | WP_003183456.1 | YqzE family protein | - |
| CPQ91_RS13205 (CPQ91_13205) | comGG | 2536495..2536860 (-) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| CPQ91_RS13210 (CPQ91_13210) | comGF | 2536873..2537361 (-) | 489 | WP_011201694.1 | competence type IV pilus minor pilin ComGF | - |
| CPQ91_RS13215 (CPQ91_13215) | comGE | 2537270..2537617 (-) | 348 | WP_009327907.1 | competence type IV pilus minor pilin ComGE | - |
| CPQ91_RS13220 (CPQ91_13220) | comGD | 2537601..2538038 (-) | 438 | WP_009327905.1 | competence type IV pilus minor pilin ComGD | - |
| CPQ91_RS13225 (CPQ91_13225) | comGC | 2538044..2538337 (-) | 294 | WP_003183466.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CPQ91_RS13230 (CPQ91_13230) | comGB | 2538351..2539385 (-) | 1035 | WP_011198115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CPQ91_RS13235 (CPQ91_13235) | comGA | 2539375..2540439 (-) | 1065 | WP_003183477.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CPQ91_RS13240 (CPQ91_13240) | - | 2540596..2541435 (-) | 840 | WP_061578398.1 | STAS domain-containing protein | - |
| CPQ91_RS13250 (CPQ91_13250) | - | 2541677..2542054 (-) | 378 | WP_003183482.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| CPQ91_RS13255 (CPQ91_13255) | - | 2542263..2542508 (+) | 246 | WP_003183483.1 | DUF2626 domain-containing protein | - |
| CPQ91_RS13260 (CPQ91_13260) | - | 2542626..2544056 (+) | 1431 | WP_016886315.1 | IS1182 family transposase | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 39737.95 Da Isoelectric Point: 9.3543
>NTDB_id=249595 CPQ91_RS13230 WP_011198115.1 2538351..2539385(-) (comGB) [Bacillus licheniformis strain ATCC 9789]
MKIKMKWPVREQADLLKKLGDMMQSGYTILDALSMLKLQLNERRRADLTFAMEKLTEGCPVFQVLEMISFHKDAVTIVYF
AEQHGNLPFAFRQSGELLHRKIAQSEKLKKAARYPLFLVLTVCVIISIMKSAIVPQFSAIYESMNVETSFATTLIFYVFD
HFYLFFAGLPLVAAALSLYYLCSFRHKPPEDKMAFLITIPLLGQTFKLFNSYFLSLQLSNLLQAGLSVYDSLKAFESQPF
LRFHKNEAKRLIERLKQGESLEQMLAGHPFYENDLAKAVAHGQLNGHLYRELYSYSQFLIERLERKAEKWTGLIQPLIYG
LTAAMILILYLSMLLPMYQMMNQL
MKIKMKWPVREQADLLKKLGDMMQSGYTILDALSMLKLQLNERRRADLTFAMEKLTEGCPVFQVLEMISFHKDAVTIVYF
AEQHGNLPFAFRQSGELLHRKIAQSEKLKKAARYPLFLVLTVCVIISIMKSAIVPQFSAIYESMNVETSFATTLIFYVFD
HFYLFFAGLPLVAAALSLYYLCSFRHKPPEDKMAFLITIPLLGQTFKLFNSYFLSLQLSNLLQAGLSVYDSLKAFESQPF
LRFHKNEAKRLIERLKQGESLEQMLAGHPFYENDLAKAVAHGQLNGHLYRELYSYSQFLIERLERKAEKWTGLIQPLIYG
LTAAMILILYLSMLLPMYQMMNQL
Nucleotide
Download Length: 1035 bp
>NTDB_id=249595 CPQ91_RS13230 WP_011198115.1 2538351..2539385(-) (comGB) [Bacillus licheniformis strain ATCC 9789]
ATGAAGATTAAAATGAAGTGGCCTGTCCGGGAACAGGCGGACCTTCTGAAAAAACTAGGAGACATGATGCAGAGTGGCTA
TACGATTTTGGATGCTTTAAGTATGCTGAAATTGCAATTGAATGAAAGACGAAGAGCGGATCTGACATTTGCGATGGAGA
AGCTGACAGAAGGGTGTCCTGTGTTTCAAGTTCTTGAAATGATTTCCTTTCACAAGGATGCTGTCACCATTGTTTACTTT
GCCGAACAGCACGGGAATTTGCCATTTGCCTTTAGGCAGAGCGGAGAGCTGCTTCACCGCAAGATCGCTCAAAGCGAAAA
ATTAAAGAAAGCCGCCAGATACCCCTTGTTTTTAGTTTTAACGGTCTGCGTCATCATCTCTATTATGAAATCAGCAATAG
TTCCGCAATTTTCCGCCATCTATGAATCGATGAACGTTGAAACGTCTTTTGCAACGACTCTCATCTTTTATGTTTTCGAT
CACTTTTATCTTTTTTTCGCGGGACTGCCGCTGGTTGCCGCAGCTCTATCCCTCTATTATCTGTGTTCATTCCGCCATAA
ACCTCCAGAAGACAAAATGGCCTTTCTCATTACAATTCCCTTGCTGGGCCAAACCTTCAAACTATTCAACAGCTATTTTT
TATCGCTCCAGCTGAGCAATCTTTTGCAAGCGGGTCTGTCTGTATATGACAGTTTAAAAGCATTTGAAAGCCAGCCGTTT
TTACGATTTCATAAAAATGAAGCGAAGCGCTTGATCGAGCGGCTGAAACAGGGGGAGAGTCTGGAGCAGATGCTGGCCGG
ACATCCGTTTTATGAAAATGATTTAGCAAAGGCTGTTGCACACGGCCAACTAAATGGGCACTTATACAGAGAGCTGTATT
CATATAGTCAGTTTTTGATTGAGCGGCTTGAAAGAAAGGCCGAAAAATGGACAGGCCTGATCCAGCCATTGATTTACGGG
CTAACCGCGGCGATGATATTAATTCTTTATTTGTCCATGCTTTTGCCAATGTATCAAATGATGAACCAGCTATAA
ATGAAGATTAAAATGAAGTGGCCTGTCCGGGAACAGGCGGACCTTCTGAAAAAACTAGGAGACATGATGCAGAGTGGCTA
TACGATTTTGGATGCTTTAAGTATGCTGAAATTGCAATTGAATGAAAGACGAAGAGCGGATCTGACATTTGCGATGGAGA
AGCTGACAGAAGGGTGTCCTGTGTTTCAAGTTCTTGAAATGATTTCCTTTCACAAGGATGCTGTCACCATTGTTTACTTT
GCCGAACAGCACGGGAATTTGCCATTTGCCTTTAGGCAGAGCGGAGAGCTGCTTCACCGCAAGATCGCTCAAAGCGAAAA
ATTAAAGAAAGCCGCCAGATACCCCTTGTTTTTAGTTTTAACGGTCTGCGTCATCATCTCTATTATGAAATCAGCAATAG
TTCCGCAATTTTCCGCCATCTATGAATCGATGAACGTTGAAACGTCTTTTGCAACGACTCTCATCTTTTATGTTTTCGAT
CACTTTTATCTTTTTTTCGCGGGACTGCCGCTGGTTGCCGCAGCTCTATCCCTCTATTATCTGTGTTCATTCCGCCATAA
ACCTCCAGAAGACAAAATGGCCTTTCTCATTACAATTCCCTTGCTGGGCCAAACCTTCAAACTATTCAACAGCTATTTTT
TATCGCTCCAGCTGAGCAATCTTTTGCAAGCGGGTCTGTCTGTATATGACAGTTTAAAAGCATTTGAAAGCCAGCCGTTT
TTACGATTTCATAAAAATGAAGCGAAGCGCTTGATCGAGCGGCTGAAACAGGGGGAGAGTCTGGAGCAGATGCTGGCCGG
ACATCCGTTTTATGAAAATGATTTAGCAAAGGCTGTTGCACACGGCCAACTAAATGGGCACTTATACAGAGAGCTGTATT
CATATAGTCAGTTTTTGATTGAGCGGCTTGAAAGAAAGGCCGAAAAATGGACAGGCCTGATCCAGCCATTGATTTACGGG
CTAACCGCGGCGATGATATTAATTCTTTATTTGTCCATGCTTTTGCCAATGTATCAAATGATGAACCAGCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
56.656 |
93.895 |
0.532 |