Detailed information    

insolico Bioinformatically predicted

Overview


Name   rok   Type   Regulator
Locus tag   CPQ91_RS09900 Genome accession   NZ_CP023729
Coordinates   1928154..1928630 (+) Length   158 a.a.
NCBI ID   WP_003182174.1    Uniprot ID   A0A1Y0YPP5
Organism   Bacillus licheniformis strain ATCC 9789     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1923154..1933630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPQ91_RS09865 (CPQ91_09865) - 1923710..1924012 (+) 303 WP_003182160.1 hypothetical protein -
  CPQ91_RS09870 (CPQ91_09870) - 1924247..1925224 (+) 978 WP_061578587.1 alpha/beta hydrolase -
  CPQ91_RS09880 (CPQ91_09880) - 1925656..1926060 (+) 405 WP_231082904.1 hypothetical protein -
  CPQ91_RS09885 (CPQ91_09885) - 1926202..1926798 (+) 597 WP_003182167.1 SAM-dependent methyltransferase -
  CPQ91_RS09890 (CPQ91_09890) - 1926905..1927384 (+) 480 WP_061578588.1 YdhH/YoaO family protein -
  CPQ91_RS09895 (CPQ91_09895) - 1927418..1927993 (+) 576 WP_021837496.1 GNAT family N-acetyltransferase -
  CPQ91_RS09900 (CPQ91_09900) rok 1928154..1928630 (+) 477 WP_003182174.1 hypothetical protein Regulator
  CPQ91_RS22280 - 1928749..1928922 (+) 174 WP_003182176.1 hypothetical protein -
  CPQ91_RS09905 (CPQ91_09905) - 1929271..1929890 (-) 620 Protein_1907 hypothetical protein -
  CPQ91_RS09910 (CPQ91_09910) - 1930604..1931188 (+) 585 WP_009328246.1 TetR family transcriptional regulator -
  CPQ91_RS09915 (CPQ91_09915) - 1931270..1931605 (+) 336 WP_011198004.1 DMT family transporter -
  CPQ91_RS09920 (CPQ91_09920) - 1931605..1931922 (+) 318 WP_011198005.1 DMT family transporter -
  CPQ91_RS09925 (CPQ91_09925) speG 1931951..1932493 (+) 543 WP_003182184.1 spermidine N1-acetyltransferase -
  CPQ91_RS09930 (CPQ91_09930) - 1932531..1932857 (-) 327 WP_206696990.1 YxeA family protein -
  CPQ91_RS09935 (CPQ91_09935) - 1933071..1933505 (+) 435 WP_003182188.1 hypothetical protein -

Sequence


Protein


Download         Length: 158 a.a.        Molecular weight: 18302.15 Da        Isoelectric Point: 10.1366

>NTDB_id=249587 CPQ91_RS09900 WP_003182174.1 1928154..1928630(+) (rok) [Bacillus licheniformis strain ATCC 9789]
MFNEREALRLRLEQLGDAEIQVMRELRKEREGIYSKLRELDRESEPAINKKSSLIDLASAAAEELKQSQHAADKHPPIKT
PSHTIFQSKTTIQREAAINILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILHKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=249587 CPQ91_RS09900 WP_003182174.1 1928154..1928630(+) (rok) [Bacillus licheniformis strain ATCC 9789]
ATGTTCAACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATCCAGGTGATGCGGGAATTGCG
AAAAGAACGAGAGGGCATTTATTCGAAGCTGCGTGAATTGGATCGGGAGAGTGAGCCTGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAGCATGCCGCTGACAAACATCCGCCTATCAAGACC
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGTGAGGCTGCCATAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCATAAAGAAAAAGACCTTTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Y0YPP5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

45.055

100

0.519


Multiple sequence alignment