Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CPQ91_RS02325 Genome accession   NZ_CP023729
Coordinates   464862..465815 (+) Length   317 a.a.
NCBI ID   WP_061578574.1    Uniprot ID   -
Organism   Bacillus licheniformis strain ATCC 9789     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 459862..470815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPQ91_RS02310 (CPQ91_02310) - 459914..461341 (+) 1428 WP_009330185.1 sensor histidine kinase -
  CPQ91_RS22475 - 461374..462351 (-) 978 WP_232513224.1 methyl-accepting chemotaxis protein -
  CPQ91_RS22480 - 462364..462495 (-) 132 Protein_424 hypothetical protein -
  CPQ91_RS22485 - 462600..463106 (-) 507 Protein_425 MCP four helix bundle domain-containing protein -
  CPQ91_RS02320 (CPQ91_02320) - 463227..464588 (-) 1362 WP_009330182.1 aspartate kinase -
  CPQ91_RS02325 (CPQ91_02325) ceuB 464862..465815 (+) 954 WP_061578574.1 ABC transporter permease Machinery gene
  CPQ91_RS02330 (CPQ91_02330) - 465805..466749 (+) 945 WP_003178939.1 iron chelate uptake ABC transporter family permease subunit -
  CPQ91_RS02335 (CPQ91_02335) - 466749..467507 (+) 759 WP_003178940.1 ABC transporter ATP-binding protein -
  CPQ91_RS02340 (CPQ91_02340) - 467522..468469 (+) 948 WP_003178942.1 siderophore ABC transporter substrate-binding protein -
  CPQ91_RS02345 (CPQ91_02345) - 468638..470059 (-) 1422 WP_061578573.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35279.70 Da        Isoelectric Point: 10.1282

>NTDB_id=249561 CPQ91_RS02325 WP_061578574.1 464862..465815(+) (ceuB) [Bacillus licheniformis strain ATCC 9789]
MKLRYLLLMLIILSFSSIFIGVKELSPLDLFRFNEDEIQTLYISRIPRLISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIIAIVLFSSAGIVVKILFAFVFALFGSFLFVKILDRIKFKDAIFIPLVGMMLGSVVSAIYTFMAYQYNII
QNVNAWFEGNFSLVMKGRYEFLFLSIPLVIIAYLFANKFTLAGMGESFSINLGLKYKRVVNIGLIIVSIISSVVILTIGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLFCDIAGRLVIYPYEISVGLMVGIIGSGVFLYLLLRRKAYAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=249561 CPQ91_RS02325 WP_061578574.1 464862..465815(+) (ceuB) [Bacillus licheniformis strain ATCC 9789]
ATGAAATTACGATACCTATTGCTAATGCTCATCATTCTTTCATTCAGCTCGATATTCATCGGCGTTAAGGAGCTTTCGCC
TCTTGACCTTTTCCGCTTTAATGAGGACGAAATTCAAACGCTTTACATAAGCAGAATCCCGCGCTTGATCAGCATCGTGC
TTGCGGGAATGAGCTTGAGCATCTGCGGGCTGATTATGCAGCAGCTGACGCGCAATAAATTTGTTTCACCAACCACCGCT
GGAACGATGGATTGGGCTCGGCTCGGCGTGATCATTGCGATCGTGCTTTTTTCGTCTGCAGGGATAGTAGTCAAAATACT
GTTTGCCTTTGTTTTTGCACTGTTTGGCAGCTTTTTGTTCGTCAAAATTTTGGACAGAATCAAGTTCAAAGATGCGATTT
TCATCCCTCTCGTCGGAATGATGCTCGGGAGCGTTGTCAGCGCCATCTATACTTTCATGGCTTATCAGTACAATATTATT
CAAAACGTCAATGCATGGTTTGAAGGGAATTTTTCGCTGGTCATGAAGGGGAGGTATGAGTTCTTATTTCTGAGTATACC
GCTCGTTATCATTGCCTATCTGTTCGCCAATAAATTCACGTTGGCCGGGATGGGGGAGTCATTTTCCATCAATCTTGGTT
TGAAATACAAGCGGGTGGTCAATATCGGGCTGATCATCGTATCTATTATTTCGTCCGTCGTCATCCTGACGATCGGCACG
CTTCCCTTTTTGGGATTGATCATCCCGAACATCGTGTCCATTTACAGGGGAGATCATTTGAAAAACAGCCTGCCTCACAC
GGCGGTTCTCGGAGCCGTTTTCGTCTTGTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGGTTG
GTTTGATGGTCGGCATCATCGGGAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGCGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.949

99.685

0.508

Multiple sequence alignment