Detailed information NTG0249530

Bioinformatically predicted

Overview

• Name: recR
• Type: Machinery gene
• Locus tag: APPSER1_RS00395
• Genome accession: NZ_CP029003
• Coordinates: 85183..85788 (-)
• Length: 201 a.a.
• NCBI ID: WP_005618700.1
• Uniprot ID: A0ABM6X5M1
• Organism: Actinobacillus pleuropneumoniae serovar 1 str. 4074
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 80183..90788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APPSER1_RS00365 (APPSER1_00365)	-	80932..81921 (+)	990	WP_005595702.1	peptide ABC transporter ATP-binding protein	-
APPSER1_RS00370 (APPSER1_00370)	psiE	81994..82404 (-)	411	WP_005595704.1	phosphate-starvation-inducible protein PsiE	-
APPSER1_RS00375 (APPSER1_00375)	-	82482..83114 (-)	633	WP_005595707.1	hydrolase	-
APPSER1_RS00380 (APPSER1_00380)	-	83169..83513 (-)	345	WP_005595710.1	RidA family protein	-
APPSER1_RS00385 (APPSER1_00385)	-	83600..84637 (-)	1038	WP_005595712.1	branched-chain amino acid aminotransferase	-
APPSER1_RS00390 (APPSER1_00390)	grxD	84779..85111 (-)	333	WP_005595713.1	Grx4 family monothiol glutaredoxin	-
APPSER1_RS00395 (APPSER1_00395)	recR	85183..85788 (-)	606	WP_005618700.1	recombination mediator RecR	Machinery gene
APPSER1_RS00400 (APPSER1_00400)	-	85859..86188 (-)	330	WP_005600053.1	YbaB/EbfC family nucleoid-associated protein	-
APPSER1_RS00405 (APPSER1_00405)	-	86357..87214 (-)	858	WP_005595716.1	energy transducer TonB family protein	-
APPSER1_RS00410 (APPSER1_00410)	exbD	87224..87613 (-)	390	WP_005595717.1	TonB system transport protein ExbD	-
APPSER1_RS00415 (APPSER1_00415)	exbB	87658..88110 (-)	453	WP_005595719.1	TonB-system energizer ExbB	-
APPSER1_RS00420 (APPSER1_00420)	glpE	88298..88624 (+)	327	WP_005595720.1	thiosulfate sulfurtransferase GlpE	-
APPSER1_RS00425 (APPSER1_00425)	-	88668..89513 (+)	846	WP_005595722.1	co-chaperone YbbN	-
APPSER1_RS00430 (APPSER1_00430)	dhaM	89587..89994 (-)	408	WP_005595723.1	dihydroxyacetone kinase phosphoryl donor subunit DhaM	-
APPSER1_RS00435 (APPSER1_00435)	dhaL	90003..90629 (-)	627	WP_005595724.1	dihydroxyacetone kinase subunit DhaL	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22182.40 Da
• Isoelectric Point: 6.4865

>NTDB_id=249530 APPSER1_RS00395 WP_005618700.1 85183..85788(-) (recR) [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
MQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEEDECNICKNPRRQMS
GQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEVILATNPTIEGDATANYIAEM
CRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDISL

Nucleotide

• Length: 606 bp

>NTDB_id=249530 APPSER1_RS00395 WP_005618700.1 85183..85788(-) (recR) [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
ATGCAAATTAGCCCTTTACTCGAAAATCTGATGGAAGCCCTACGTGCATTACCCGGCGTCGGTCCGAAATCCGCACAACG
TATGGCGTATCATTTATTGCAACGCAATCGTTCCGGCGGTATCAATTTATCCAAAGCCTTAAATGAAGCGATGACGCATA
TCGGTCATTGCCGTTCTTGCCGTACTTTTACCGAAGAAGACGAATGCAATATTTGTAAAAATCCTCGTCGCCAAATGAGC
GGTCAGCTTTGCGTAGTAGAAATGCCGGAAGATATTCAAGCGATTGAACAAACCGGACAGTTTTCGGGACGTTATTTCGT
ATTAATGGGACATCTTTCACCGCTAGACGGTATCGGACCGAGAGAAATCGGCTTGGATTTGTTACAAAGCCGTTTAGAAA
ACGAATCTTTTCACGAAGTTATTCTAGCTACCAATCCGACCATTGAAGGTGATGCCACCGCCAACTATATTGCGGAAATG
TGCCGCATTCACAACGTGAAAGTAACTCGAATTGCGCATGGGATTCCGGTCGGCGGTTCATTAGAAATGGTGGACGGTAC
GACCCTTTCCCACTCTTTTGCCGGCAGACGAGATATTTCGTTATAA

Domains

Predicted by InterProScan.

• Toprim domain (Toprim_4) (82-172)

• RecR protein (RecR_ZnF) (42-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recR	Bacillus subtilis subsp. subtilis str. 168	42.714	99.005	0.423
recR	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42	99.502	0.418