Detailed information NTG0249401

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: FORC83_RS05590
• Genome accession: NZ_CP028933
• Coordinates: 1075171..1076121 (+)
• Length: 316 a.a.
• NCBI ID: WP_002899461.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain FORC_083
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1070171..1081121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC83_RS05575 (FORC83_1122)	-	1071019..1072950 (-)	1932	WP_053875604.1	hypothetical protein	-
FORC83_RS05580 (FORC83_1123)	-	1073026..1074300 (+)	1275	WP_052785345.1	DUF2972 domain-containing protein	-
FORC83_RS05585 (FORC83_1124)	-	1074264..1075112 (-)	849	WP_074486956.1	glycosyltransferase family 2 protein	-
FORC83_RS05590 (FORC83_1125)	waaF	1075171..1076121 (+)	951	WP_002899461.1	lipopolysaccharide heptosyltransferase II	Regulator
FORC83_RS05595 (FORC83_1126)	-	1076107..1076871 (-)	765	WP_053875603.1	glycosyltransferase family 25 protein	-
FORC83_RS05600 (FORC83_1127)	gmhA	1076871..1077431 (-)	561	WP_002869619.1	D-sedoheptulose 7-phosphate isomerase	-
FORC83_RS05605 (FORC83_1128)	rfaE1	1077428..1078813 (-)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
FORC83_RS05610 (FORC83_1129)	rfaD	1078806..1079759 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
FORC83_RS05615 (FORC83_1130)	gmhB	1079760..1080321 (-)	562	Protein_1104	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
FORC83_RS05620 (FORC83_1131)	-	1080402..1080704 (+)	303	WP_002852762.1	cytochrome c	-
FORC83_RS05625 (FORC83_1132)	ccoS	1080727..1080933 (-)	207	WP_002877126.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36265.84 Da
• Isoelectric Point: 10.2322

>NTDB_id=249401 FORC83_RS05590 WP_002899461.1 1075171..1076121(+) (waaF) [Campylobacter jejuni strain FORC_083]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=249401 FORC83_RS05590 WP_002899461.1 1075171..1076121(+) (waaF) [Campylobacter jejuni strain FORC_083]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCACGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGTTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGATAGT
GGCCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAACGAAAATGCAAAATTAGTACATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.541	99.367	0.949