Detailed information NTG0249256

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJ12664_RS05630
• Genome accession: NZ_CP028912
• Coordinates: 1080542..1081501 (+)
• Length: 319 a.a.
• NCBI ID: WP_108614564.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain NCTC 12664
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1075542..1086501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJ12664_RS05610 (CJ12664_1083)	neuC	1076107..1077222 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
CJ12664_RS08745	-	1077219..1078133 (+)	915	Protein_1079	beta-1,4-N-acetylgalactosaminyltransferase	-
CJ12664_RS08750	-	1078167..1078829 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
CJ12664_RS05620 (CJ12664_1085)	-	1078824..1079675 (-)	852	WP_014516804.1	glycosyltransferase	-
CJ12664_RS05625 (CJ12664_1086)	waaV	1079659..1080483 (-)	825	WP_108614563.1	glycosyltransferase family 2 protein	-
CJ12664_RS05630 (CJ12664_1087)	waaF	1080542..1081501 (+)	960	WP_108614564.1	lipopolysaccharide heptosyltransferase II	Regulator
CJ12664_RS05635 (CJ12664_1088)	gmhA	1081482..1082042 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
CJ12664_RS05640 (CJ12664_1089)	rfaE1	1082039..1083424 (-)	1386	WP_002901184.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJ12664_RS05645 (CJ12664_1090)	rfaD	1083417..1084370 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
CJ12664_RS05650 (CJ12664_1091)	gmhB	1084371..1084932 (-)	562	Protein_1087	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJ12664_RS05655 (CJ12664_1092)	-	1085013..1085315 (+)	303	WP_002852762.1	cytochrome c	-
CJ12664_RS05660 (CJ12664_1093)	ccoS	1085338..1085544 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36766.31 Da
• Isoelectric Point: 10.2870

>NTDB_id=249256 CJ12664_RS05630 WP_108614564.1 1080542..1081501(+) (waaF) [Campylobacter jejuni strain NCTC 12664]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKVHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=249256 CJ12664_RS05630 WP_108614564.1 1080542..1081501(+) (waaF) [Campylobacter jejuni strain NCTC 12664]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGTTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.597	99.687	0.953