Detailed information NTG0249103

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: CP942_RS11240
• Genome accession: NZ_CP023666
• Coordinates: 2289308..2290687 (-)
• Length: 459 a.a.
• NCBI ID: WP_020449839.1
• Uniprot ID: A0AAW6KF37
• Organism: Bacillus paralicheniformis strain Bac48
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2284308..2295687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CP942_RS11220	ispF	2285827..2286303 (-)	477	WP_020449842.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
CP942_RS11225	ispD	2286296..2286991 (-)	696	WP_020449841.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
CP942_RS11230	-	2287008..2288096 (-)	1089	WP_009330350.1	PIN/TRAM domain-containing protein	-
CP942_RS11235	disA	2288228..2289304 (-)	1077	WP_020449840.1	DNA integrity scanning diadenylate cyclase DisA	-
CP942_RS11240	radA	2289308..2290687 (-)	1380	WP_020449839.1	DNA repair protein RadA	Machinery gene
CP942_RS11245	clpC	2290767..2293199 (-)	2433	WP_020449838.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
CP942_RS11250	-	2293196..2294287 (-)	1092	WP_020449837.1	protein arginine kinase	-
CP942_RS11255	-	2294287..2294841 (-)	555	WP_003178271.1	UvrB/UvrC motif-containing protein	-
CP942_RS11260	-	2294856..2295320 (-)	465	WP_020449835.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 49848.28 Da
• Isoelectric Point: 7.4339

>NTDB_id=249103 CP942_RS11240 WP_020449839.1 2289308..2290687(-) (radA) [Bacillus paralicheniformis strain Bac48]
MAKTKTKFICHSCGYESAKWMGKCPGCGTWNTMVEETIKKPAANRRTAFSHSVQTVQKPSPLTSIETTEEPRIKTKLGEF
NRVLGNGIVKGSLVLIGGDPGIGKSTLLLQVSAQLADSKENVLYISGEESVKQTKLRADRLGINSPTLHVLSETDMEYIT
SSIEEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMRIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGAAGSSVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAVAVSIASSFRDTPPHPTDCFIGEVGLT
GEVRRVSRIEQRVQEAAKLGFKRMIIPSANVEGWTKPKGIEVVGVENVAEALRASLGGS

Nucleotide

• Length: 1380 bp

>NTDB_id=249103 CP942_RS11240 WP_020449839.1 2289308..2290687(-) (radA) [Bacillus paralicheniformis strain Bac48]
ATGGCTAAAACAAAGACTAAATTCATTTGTCACTCATGCGGTTACGAATCCGCCAAGTGGATGGGGAAGTGCCCCGGATG
CGGCACATGGAATACCATGGTGGAAGAAACGATAAAAAAACCCGCCGCCAACAGAAGAACCGCTTTTTCACATTCCGTTC
AAACGGTGCAAAAGCCTTCACCTCTCACTTCAATCGAAACAACAGAAGAGCCGCGAATTAAAACGAAACTGGGCGAATTC
AACCGCGTCTTGGGAAACGGTATTGTCAAAGGTTCACTCGTTTTAATCGGAGGCGATCCCGGCATCGGGAAATCAACCTT
GCTGCTTCAAGTATCTGCCCAGCTCGCTGATTCAAAAGAAAATGTCCTGTACATCTCAGGTGAAGAATCGGTCAAGCAGA
CAAAGCTGAGAGCAGACCGTCTAGGCATCAACAGTCCCACTCTTCACGTTTTATCTGAAACCGATATGGAGTATATTACG
TCTTCTATAGAAGAGATGAATCCATCATTCGTGGTGGTTGATTCGATTCAAACCGTTTACCAAAGTGATATTACATCTGC
TCCAGGCAGCGTGTCCCAGGTCAGGGAATGCACCGCTGAGCTGATGAGAATTGCAAAAACAAAAGGGATTCCGATATTTA
TCGTCGGGCATGTCACAAAAGAAGGTTCGATTGCCGGGCCGAGACTTCTGGAACATATGGTCGACACCGTCCTTTATTTT
GAAGGTGAGCGGCATCATACATTTCGGATTTTAAGAGCCGTCAAAAACCGGTTTGGATCAACGAATGAAATGGGAATCTT
TGAAATGAGGGAAGAGGGCCTGACAGAAGTGCTGAATCCGTCGGAGATCTTTCTCGAAGAGCGCTCGGCTGGAGCAGCCG
GCTCGAGTGTCGTGGCTTCAATGGAAGGCACGAGGCCGGTCTTAGTAGAGATTCAGGCGCTGATTTCCCCGACGAGTTTT
GGAAATCCGCGCAGGATGGCAACCGGAATTGATCATAACCGCGTCTCATTGCTGATGGCGGTTTTAGAAAAACGGGTGGG
GCTGCTGCTGCAAAATCAAGACGCCTATTTAAAAGTCGCCGGCGGCGTCAAGCTGGACGAGCCGGCGATCGACCTCGCCG
TTGCGGTGAGCATCGCCTCAAGCTTCAGAGACACCCCGCCTCATCCGACGGATTGTTTTATCGGCGAAGTCGGCTTGACA
GGGGAAGTCCGCAGAGTATCAAGGATAGAACAGAGGGTGCAGGAAGCGGCGAAGCTTGGTTTTAAAAGAATGATTATTCC
TTCTGCAAATGTGGAAGGATGGACAAAGCCGAAAGGAATTGAAGTCGTCGGTGTTGAAAATGTAGCTGAGGCCCTTCGAG
CTTCATTAGGAGGATCATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (66-222)

• Subunit ChlI of Mg-chelatase (ChlI) (365-430)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	91.048	99.782	0.908
radA	Streptococcus mitis NCTC 12261	62.031	98.693	0.612
radA	Streptococcus pneumoniae Rx1	62.031	98.693	0.612
radA	Streptococcus pneumoniae D39	62.031	98.693	0.612
radA	Streptococcus pneumoniae R6	62.031	98.693	0.612
radA	Streptococcus pneumoniae TIGR4	62.031	98.693	0.612
radA	Streptococcus mitis SK321	61.81	98.693	0.61