Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CP942_RS06995 Genome accession   NZ_CP023666
Coordinates   1375031..1375822 (-) Length   263 a.a.
NCBI ID   WP_105980522.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain Bac48     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1370031..1380822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS06960 - 1371860..1372261 (-) 402 WP_020450624.1 GtrA family protein -
  CP942_RS06965 - 1372230..1373189 (-) 960 WP_105979152.1 glycosyltransferase family 2 protein -
  CP942_RS06975 - 1373936..1374205 (-) 270 WP_020450622.1 YfhJ family protein -
  CP942_RS06980 - 1374336..1374485 (+) 150 WP_003179924.1 small, acid-soluble spore protein K -
  CP942_RS06985 - 1374554..1374682 (+) 129 WP_369878957.1 YpzG family protein -
  CP942_RS06990 - 1374712..1375026 (-) 315 WP_025810180.1 YfhH family protein -
  CP942_RS06995 recX 1375031..1375822 (-) 792 WP_105980522.1 recombination regulator RecX Regulator
  CP942_RS07000 - 1375891..1376790 (+) 900 WP_234025563.1 TIGR01777 family oxidoreductase -
  CP942_RS07005 - 1377057..1377587 (+) 531 WP_020450619.1 GNAT family N-acetyltransferase -
  CP942_RS07010 - 1377655..1377768 (+) 114 WP_023856002.1 YfhE family protein -
  CP942_RS07015 - 1377837..1378031 (+) 195 WP_020450618.1 YfhD family protein -
  CP942_RS07020 - 1378065..1378643 (-) 579 WP_020450617.1 nitroreductase -
  CP942_RS07025 - 1378746..1379642 (-) 897 WP_105979155.1 PhzF family phenazine biosynthesis isomerase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30292.54 Da        Isoelectric Point: 7.0672

>NTDB_id=249097 CP942_RS06995 WP_105980522.1 1375031..1375822(-) (recX) [Bacillus paralicheniformis strain Bac48]
MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVKKGFKKALDYLSYRMRSTKEV
KDHLKKKDVADSAITEILHMLKGYKYLDDRAFAAAYVSTHRKTSGKGPDVLFRELKLKGIDDELIQDALSSFSFSDQVEA
AVKHAEKVLKKEKKLSSKETKQAIEQHLVRKGFSFDVISAALQETDYENDDSAEREALEKQGEKAMKRCGYDGSYETKMK
VKQHLFRKGFSIDMIDQFLDEKG

Nucleotide


Download         Length: 792 bp        

>NTDB_id=249097 CP942_RS06995 WP_105980522.1 1375031..1375822(-) (recX) [Bacillus paralicheniformis strain Bac48]
ATGCCATATATTACAAAGATTTCTGCCCAGAAAAACAATGAAGAACGGGTCAATATTTTTCTGGATGAAAAGTATGCGTT
CAGCGTCGACCTGGACGTGCTCGTCAAGTTTGACCTGCGAAAAGGCAAAGAGCTTGATGAGCTTGATATCATTGAGATTC
AGTACGGAGACGACGTAAAAAAAGGGTTCAAAAAAGCGCTCGATTATTTGTCATACCGGATGCGCTCGACAAAGGAAGTT
AAAGACCATCTCAAGAAAAAAGACGTCGCAGACTCCGCGATCACAGAAATCCTGCATATGCTTAAAGGTTATAAATATTT
GGACGACCGCGCATTTGCGGCTGCATATGTCAGCACCCACAGAAAAACGAGCGGCAAAGGCCCCGATGTCCTATTCAGAG
AGCTTAAATTGAAAGGGATCGATGATGAACTGATTCAGGATGCGCTCAGTTCGTTTTCGTTTTCCGATCAGGTCGAGGCC
GCGGTCAAGCATGCGGAAAAAGTGCTGAAAAAAGAAAAAAAGCTGTCCTCCAAAGAGACGAAACAGGCCATCGAACAGCA
CCTTGTCAGAAAGGGGTTCTCCTTCGATGTCATCTCGGCCGCGCTTCAGGAAACGGATTACGAAAACGACGACAGCGCTG
AAAGGGAAGCGCTTGAGAAGCAAGGGGAAAAAGCGATGAAGAGGTGCGGTTATGACGGATCATACGAAACGAAAATGAAG
GTCAAACAGCATCTGTTCAGAAAAGGCTTTTCAATCGACATGATTGATCAATTTTTAGATGAAAAGGGATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

69.732

99.24

0.692

Multiple sequence alignment