Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CP942_RS03540 Genome accession   NZ_CP023666
Coordinates   727418..728005 (-) Length   195 a.a.
NCBI ID   WP_020451209.1    Uniprot ID   A0A6I7TW81
Organism   Bacillus paralicheniformis strain Bac48     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 722418..733005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS03515 mobB 722653..723180 (-) 528 WP_020451214.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  CP942_RS03520 glp 723147..724439 (-) 1293 WP_101560811.1 gephyrin-like molybdotransferase Glp -
  CP942_RS03525 - 724458..725471 (-) 1014 WP_101560810.1 molybdopterin-synthase adenylyltransferase MoeB -
  CP942_RS03530 - 725577..726164 (-) 588 WP_023857285.1 molybdenum cofactor guanylyltransferase -
  CP942_RS03535 - 726317..727273 (+) 957 WP_023857286.1 sporulation protein -
  CP942_RS03540 rok 727418..728005 (-) 588 WP_020451209.1 transcriptional regulator Rok Regulator
  CP942_RS03545 - 728552..729010 (-) 459 WP_020451208.1 redoxin domain-containing protein -
  CP942_RS03550 ahpA 729100..729642 (-) 543 WP_020451207.1 biofilm-specific peroxidase AhpA -
  CP942_RS03555 - 729938..730183 (-) 246 WP_003181323.1 YkuS family protein -
  CP942_RS03560 - 730246..731370 (-) 1125 WP_065644040.1 N-acetyldiaminopimelate deacetylase -
  CP942_RS03565 dapD 731440..732150 (-) 711 WP_065644039.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CP942_RS03570 - 732257..732709 (-) 453 WP_095290382.1 flavodoxin -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22537.49 Da        Isoelectric Point: 9.9960

>NTDB_id=249079 CP942_RS03540 WP_020451209.1 727418..728005(-) (rok) [Bacillus paralicheniformis strain Bac48]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 588 bp        

>NTDB_id=249079 CP942_RS03540 WP_020451209.1 727418..728005(-) (rok) [Bacillus paralicheniformis strain Bac48]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTGGAGCAGCTGAATGAGGCTGAGGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAATATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACGGAATCTCTCCCTGTTTTAGCTGAATTAGCTGCGCAGGAGATGAAGAGCTATCAGCAACAACAG
CAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGG
AACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAA
AACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATG
ACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGA
GATTTCTACCGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TW81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.684

97.436

0.815

Multiple sequence alignment