Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CP942_RS01595 Genome accession   NZ_CP023666
Coordinates   347843..348319 (-) Length   158 a.a.
NCBI ID   WP_026579660.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain Bac48     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 342843..353319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS01560 - 343117..343557 (-) 441 WP_039072735.1 hypothetical protein -
  CP942_RS01565 - 343767..344093 (+) 327 WP_217626321.1 YxeA family protein -
  CP942_RS01570 speG 344130..344672 (-) 543 WP_020451574.1 spermidine N1-acetyltransferase -
  CP942_RS01575 - 344701..345018 (-) 318 WP_020451573.1 DMT family transporter -
  CP942_RS01580 - 345021..345353 (-) 333 WP_020451572.1 DMT family transporter -
  CP942_RS01585 - 345434..346018 (-) 585 WP_020451571.1 TetR family transcriptional regulator -
  CP942_RS01590 - 346578..347198 (+) 621 WP_020451570.1 hypothetical protein -
  CP942_RS22465 - 347551..347721 (-) 171 WP_162157328.1 hypothetical protein -
  CP942_RS01595 rok 347843..348319 (-) 477 WP_026579660.1 hypothetical protein Regulator
  CP942_RS01600 - 348450..349021 (-) 572 Protein_319 N-acetyltransferase family protein -
  CP942_RS01605 - 349055..349537 (-) 483 WP_020451566.1 DUF4944 domain-containing protein -
  CP942_RS01610 - 349643..350239 (-) 597 WP_105978848.1 SAM-dependent methyltransferase -
  CP942_RS01615 - 350350..350571 (-) 222 WP_105978849.1 hypothetical protein -
  CP942_RS22355 - 350631..351612 (-) 982 Protein_323 alpha/beta hydrolase family protein -
  CP942_RS01630 - 351812..352114 (-) 303 WP_026579664.1 hypothetical protein -
  CP942_RS01640 - 352744..353172 (-) 429 WP_026579666.1 HIT domain-containing protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18313.17 Da        Isoelectric Point: 10.0055

>NTDB_id=249073 CP942_RS01595 WP_026579660.1 347843..348319(-) (rok) [Bacillus paralicheniformis strain Bac48]
MFDEREALRLRLEQLGDAEIQVMRELRKERQDIYSKLRELDRESDPAINKKSSLIDLASAAAEELKQSQIAADKHPPIKT
PSHTIFQSKTTIQREAALNILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILQKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=249073 CP942_RS01595 WP_026579660.1 347843..348319(-) (rok) [Bacillus paralicheniformis strain Bac48]
ATGTTCGACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATTCAGGTGATGCGGGAATTGCG
AAAAGAACGACAGGACATTTATTCGAAGCTGCGTGAATTGGACCGGGAGAGTGATCCCGCAATTAACAAAAAATCTTCAT
TGATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAAATTGCCGCTGACAAACATCCGCCCATCAAGACT
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGCGAGGCTGCCTTAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCAAAAAGAAAAAGACCTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

43.407

100

0.5

Multiple sequence alignment