Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CP943_RS08205 Genome accession   NZ_CP023665
Coordinates   1605637..1606098 (-) Length   153 a.a.
NCBI ID   WP_020451191.1    Uniprot ID   A0A6I7TMU9
Organism   Bacillus paralicheniformis strain Bac84     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1600637..1611098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP943_RS08185 - 1600975..1602155 (-) 1181 Protein_1565 aminotransferase A -
  CP943_RS22420 - 1602347..1602505 (-) 159 WP_165583461.1 hypothetical protein -
  CP943_RS08190 - 1602677..1603201 (+) 525 WP_020451188.1 RDD family protein -
  CP943_RS08195 - 1603298..1604617 (+) 1320 WP_020451189.1 MFS transporter -
  CP943_RS08200 - 1604691..1605608 (+) 918 WP_105980914.1 chemotaxis protein -
  CP943_RS08205 kre 1605637..1606098 (-) 462 WP_020451191.1 YkyB family protein Regulator
  CP943_RS08210 - 1606240..1607541 (-) 1302 WP_020451192.1 MFS transporter -
  CP943_RS08215 - 1607630..1608127 (-) 498 WP_020451193.1 L,D-transpeptidase family protein -
  CP943_RS08220 - 1608305..1609162 (-) 858 WP_023857290.1 metallophosphoesterase -
  CP943_RS08225 fadH 1609309..1610073 (+) 765 WP_026579792.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17573.37 Da        Isoelectric Point: 10.6730

>NTDB_id=249028 CP943_RS08205 WP_020451191.1 1605637..1606098(-) (kre) [Bacillus paralicheniformis strain Bac84]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFASLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=249028 CP943_RS08205 WP_020451191.1 1605637..1606098(-) (kre) [Bacillus paralicheniformis strain Bac84]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTGAATCGCCA
TGCAAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAGCCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TMU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83

Multiple sequence alignment