Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   CPT31_RS07930 Genome accession   NZ_CP023569
Coordinates   1691337..1691963 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain BW     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1686337..1696963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPT31_RS07910 (CPT31_08045) - 1686736..1688496 (-) 1761 WP_017384808.1 Lon protease family protein -
  CPT31_RS07915 (CPT31_08050) matP 1688683..1689135 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  CPT31_RS07920 (CPT31_08055) ompA 1689201..1690253 (-) 1053 WP_017694761.1 porin OmpA -
  CPT31_RS07925 (CPT31_08060) sulA 1690610..1691119 (-) 510 WP_026080726.1 SOS-induced cell division inhibitor SulA -
  CPT31_RS07930 (CPT31_08065) sxy/tfoX 1691337..1691963 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  CPT31_RS07935 (CPT31_08070) yccS 1691920..1694082 (-) 2163 WP_017384803.1 YccS family putative transporter -
  CPT31_RS07940 (CPT31_08075) - 1694101..1694547 (-) 447 WP_003858149.1 YccF domain-containing protein -
  CPT31_RS07945 (CPT31_08080) helD 1694670..1696724 (+) 2055 WP_017384802.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=248541 CPT31_RS07930 WP_017384804.1 1691337..1691963(+) (sxy/tfoX) [Enterobacter hormaechei strain BW]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=248541 CPT31_RS07930 WP_017384804.1 1691337..1691963(+) (sxy/tfoX) [Enterobacter hormaechei strain BW]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTAACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATTCGGGTATTGTTCGCGCTTGAAGGCGCCATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment