Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CPC18_RS09400 | Genome accession | NZ_CP023561 |
| Coordinates | 1872823..1873122 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TF3198 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1867823..1878122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPC18_RS09375 (CPC18_09350) | gcvPA | 1869035..1870381 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CPC18_RS09380 (CPC18_09355) | gcvT | 1870401..1871492 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CPC18_RS09385 (CPC18_09360) | - | 1871651..1872175 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| CPC18_RS09390 (CPC18_09365) | - | 1872165..1872311 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CPC18_RS09395 (CPC18_09370) | comGF | 1872408..1872905 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CPC18_RS09400 (CPC18_09375) | comGE | 1872823..1873122 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CPC18_RS09405 (CPC18_09380) | comGD | 1873109..1873555 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CPC18_RS09410 (CPC18_09385) | comGC | 1873533..1873844 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CPC18_RS09415 (CPC18_09390) | comGB | 1873858..1874928 (-) | 1071 | WP_148121280.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CPC18_RS09420 (CPC18_09395) | comGA | 1874900..1875874 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CPC18_RS09425 (CPC18_09400) | - | 1875926..1876549 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CPC18_RS09430 (CPC18_09405) | - | 1876546..1876875 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CPC18_RS09435 (CPC18_09410) | - | 1876875..1877861 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CPC18_RS09440 (CPC18_09415) | - | 1877858..1878061 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=248423 CPC18_RS09400 WP_000844413.1 1872823..1873122(-) (comGE) [Staphylococcus aureus strain TF3198]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=248423 CPC18_RS09400 WP_000844413.1 1872823..1873122(-) (comGE) [Staphylococcus aureus strain TF3198]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |