Detailed information NTG0248314

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CPG33_RS03900
• Genome accession: NZ_CP023543
• Coordinates: 730839..731798 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CFSAN032806
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 725839..736798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPG33_RS03880 (CPG33_03880)	neuC	726408..727523 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
CPG33_RS09800	-	727520..728434 (+)	915	Protein_755	beta-1,4-N-acetylgalactosaminyltransferase	-
CPG33_RS09805	-	728468..729130 (+)	663	WP_032596875.1	acylneuraminate cytidylyltransferase	-
CPG33_RS03890 (CPG33_03890)	-	729125..729972 (-)	848	Protein_757	glycosyltransferase	-
CPG33_RS03895 (CPG33_03895)	waaV	729956..730780 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
CPG33_RS03900 (CPG33_03900)	waaF	730839..731798 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
CPG33_RS03905 (CPG33_03905)	gmhA	731779..732339 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
CPG33_RS03910 (CPG33_03910)	rfaE1	732336..733721 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CPG33_RS03915 (CPG33_03915)	rfaD	733714..734667 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
CPG33_RS03920 (CPG33_03920)	gmhB	734664..735228 (-)	565	Protein_763	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CPG33_RS03925 (CPG33_03925)	-	735309..735611 (+)	303	WP_002852762.1	cytochrome c	-
CPG33_RS03930 (CPG33_03930)	ccoS	735634..735840 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=248314 CPG33_RS03900 WP_002875425.1 730839..731798(+) (waaF) [Campylobacter jejuni strain CFSAN032806]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=248314 CPG33_RS03900 WP_002875425.1 730839..731798(+) (waaF) [Campylobacter jejuni strain CFSAN032806]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1