Detailed information NTG0248270

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CO230_RS00395
• Genome accession: NZ_CP023540
• Coordinates: 77855..78961 (+)
• Length: 368 a.a.
• NCBI ID: WP_122026801.1
• Uniprot ID: A0A3G2T9J1
• Organism: Chryseobacterium sp. 6424
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 72855..83961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO230_RS00375 (CO230_00375)	-	73601..74080 (-)	480	WP_122026797.1	hypothetical protein	-
CO230_RS00380 (CO230_00380)	-	74258..75793 (+)	1536	WP_122026798.1	YifB family Mg chelatase-like AAA ATPase	-
CO230_RS00385 (CO230_00385)	-	75801..76910 (-)	1110	WP_122026799.1	DUF3078 domain-containing protein	-
CO230_RS00390 (CO230_00390)	-	77055..77822 (+)	768	WP_122026800.1	rhomboid family intramembrane serine protease	-
CO230_RS00395 (CO230_00395)	dprA	77855..78961 (+)	1107	WP_122026801.1	DNA-processing protein DprA	Machinery gene
CO230_RS00400 (CO230_00400)	gdhA	79147..80505 (+)	1359	WP_122026802.1	NADP-specific glutamate dehydrogenase	-
CO230_RS00405 (CO230_00405)	-	80607..81098 (-)	492	WP_122026803.1	YkgJ family cysteine cluster protein	-
CO230_RS00410 (CO230_00410)	-	81275..81652 (+)	378	WP_122026804.1	group III truncated hemoglobin	-
CO230_RS00415 (CO230_00415)	-	81656..82732 (-)	1077	WP_122026805.1	calcium:proton antiporter	-
CO230_RS00420 (CO230_00420)	-	82807..83139 (-)	333	WP_122026806.1	DUF6122 family protein	-
CO230_RS00425 (CO230_00425)	-	83139..83855 (-)	717	WP_122026807.1	DNA alkylation repair protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40885.87 Da
• Isoelectric Point: 6.8763

>NTDB_id=248270 CO230_RS00395 WP_122026801.1 77855..78961(+) (dprA) [Chryseobacterium sp. 6424]
MFSEETLYSIALRRCPLIGDIVFRKLVREAGSAKEVWELSKTGLKNIHGIGQRISHEIGHDDHLKFAEKELAFCEKNQIK
ILLRHQNELPTLLAECDDAPAILYQKGDFNPQLTPISIVGTRNMTAYGKAFIHRFLEELPSQPVVTVSGLALGADTEVHH
ISLEQNIPTAAVLAHGFHMLYPAKNRRLSEKILAENGALFTEFNSSQKPDRENFIQRNRIIAGLSPATIVVETAFGGGSI
STATFAHQYNRDVFALPGRITDKYSQGCNQLIQCNKAAVISTVSALKEQLGLNNKETVAELFPTSEIRKQLNDNQIAIMN
VLDKNVAYTLDEISDRMGVASYKILPDLLELEISGYIKALSGRQYLAL

Nucleotide

• Length: 1107 bp

>NTDB_id=248270 CO230_RS00395 WP_122026801.1 77855..78961(+) (dprA) [Chryseobacterium sp. 6424]
ATGTTCTCTGAAGAAACCCTCTATTCCATAGCCCTGCGACGCTGCCCGCTTATTGGTGATATCGTGTTCCGGAAATTGGT
AAGAGAGGCGGGCTCGGCAAAAGAAGTCTGGGAACTTTCAAAAACCGGGCTGAAAAACATCCACGGTATTGGGCAGAGAA
TTTCACACGAAATTGGTCATGATGACCACCTGAAATTCGCGGAAAAAGAACTGGCTTTCTGTGAAAAAAATCAGATTAAA
ATCCTGCTCCGTCACCAGAATGAACTGCCCACATTGCTTGCGGAGTGCGACGATGCCCCTGCAATCCTTTATCAGAAAGG
TGATTTCAACCCACAGCTAACACCCATCAGCATTGTTGGTACCAGAAACATGACGGCTTATGGGAAAGCATTTATCCACC
GTTTTCTAGAAGAATTACCCTCACAGCCCGTTGTTACAGTAAGTGGACTGGCCTTAGGCGCAGATACAGAAGTGCATCAC
ATCTCTCTTGAACAGAACATCCCTACCGCGGCTGTGCTGGCGCATGGCTTTCATATGTTGTATCCGGCAAAGAACCGTCG
GCTGTCCGAAAAAATCTTGGCTGAAAACGGTGCGTTGTTTACCGAATTCAATTCTTCACAAAAACCCGACCGTGAAAATT
TCATCCAGCGAAACAGGATCATTGCCGGTCTTTCGCCTGCGACAATTGTGGTAGAAACTGCTTTCGGTGGCGGCTCTATC
AGTACCGCCACTTTCGCCCACCAGTATAACCGCGATGTCTTTGCCCTGCCGGGAAGGATCACTGATAAATACAGTCAGGG
TTGCAACCAGCTCATACAGTGCAATAAAGCGGCGGTTATATCTACCGTCTCCGCTTTGAAGGAACAATTGGGTTTGAATA
ATAAAGAAACGGTAGCTGAGTTATTCCCAACATCTGAAATCAGGAAGCAATTGAATGATAACCAAATAGCTATCATGAAT
GTGTTGGATAAAAATGTGGCCTATACGCTGGATGAGATTTCGGACCGTATGGGAGTCGCGTCTTACAAAATACTGCCCGA
TTTGCTGGAACTTGAGATTTCCGGTTACATCAAAGCACTTTCGGGAAGGCAATATCTGGCACTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (310-362)

3D structure

• AlphaFold DB: A0A3G2T9J1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	54.821	98.641	0.541