Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   CO692_RS14220 Genome accession   NZ_CP023515
Coordinates   2708366..2710183 (+) Length   605 a.a.
NCBI ID   WP_096742517.1    Uniprot ID   -
Organism   Enterococcus sp. FDAARGOS_375     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2703366..2715183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO692_RS14200 (CO692_14200) - 2703567..2705303 (+) 1737 WP_096742515.1 ABC transporter ATP-binding protein -
  CO692_RS14205 (CO692_14205) spxA 2706005..2706403 (+) 399 WP_003127030.1 transcriptional regulator SpxA -
  CO692_RS14210 (CO692_14210) - 2706556..2707206 (+) 651 WP_077452520.1 adaptor protein MecA -
  CO692_RS14215 (CO692_14215) - 2707403..2708305 (+) 903 WP_413464641.1 competence protein CoiA -
  CO692_RS14220 (CO692_14220) pepF 2708366..2710183 (+) 1818 WP_096742517.1 oligoendopeptidase F Regulator
  CO692_RS14225 (CO692_14225) - 2710315..2710971 (-) 657 WP_096742518.1 DsbA family protein -
  CO692_RS14230 (CO692_14230) - 2711080..2711655 (-) 576 WP_081118447.1 CYTH domain-containing protein -
  CO692_RS14235 (CO692_14235) - 2711851..2712519 (+) 669 WP_096742519.1 GTP pyrophosphokinase family protein -
  CO692_RS14240 (CO692_14240) - 2712525..2713322 (+) 798 WP_170920136.1 NAD kinase -
  CO692_RS14245 (CO692_14245) - 2713327..2714226 (+) 900 WP_081118448.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69011.55 Da        Isoelectric Point: 4.6952

>NTDB_id=248050 CO692_RS14220 WP_096742517.1 2708366..2710183(+) (pepF) [Enterococcus sp. FDAARGOS_375]
MSETKQLPARESIPVEKTWDLTKIYADDAAFDIEFQEIQAQVKEASRYQGTLADGPQAFLAALEFVLDLSRRLEKLYVYS
HLKNDQDTANTTYQGLYAKASSLVAQVSEAVAWFDPELLTMSDETIWGYFDQEPKLAVYRHMIEKTINERPHVLPADQEA
LLAGAGEIFGAPGNIFSVLNNADLDFPVVEDENGEKVQLSHGVYGELMESTDRSVREAAFKGLYGVYEQFRNTFAQTLST
NIKAHNFKAKARKYDSARQAALSANHIPESVYDTLVDVVNQHLPLLHRYMALRKRLLAVDTLHMYDVYTPILGEAPIRYT
YEEAVEKAKEALKPLGEEYLAVVEEAFSNRWIDVAENKGKRSGAYSSGAYDTLPYILMNWNDRLDQLFTLVHEMGHSVHS
YFTRNNQPYAYGDYSIFLAEIASTTNENILTEYMLQTETDPRVKAYVLNHFLDGFKGTIFRQTQFAEFEHFMHVEDAKGT
PLTSEFLSENYAELNAKYYGPSVEKDPEIRLEWSRIPHFYYNYYVYQYSTGFSAASALAKKILAGEPDALTNYLNYLKAG
RSDYPIEVMKKAGVDMTKADYIEDAMKVFEQRLNELEALVKEIEA

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=248050 CO692_RS14220 WP_096742517.1 2708366..2710183(+) (pepF) [Enterococcus sp. FDAARGOS_375]
ATGTCAGAAACAAAACAATTACCAGCACGTGAATCGATCCCAGTCGAAAAAACGTGGGACTTAACGAAAATCTATGCCGA
TGATGCGGCTTTTGACATAGAATTTCAAGAAATTCAAGCACAGGTCAAAGAAGCCAGCCGTTACCAAGGCACTTTAGCAG
ACGGTCCGCAAGCCTTTTTAGCCGCTTTAGAATTTGTCTTAGATCTTTCTCGCCGCTTGGAGAAACTGTATGTGTACAGC
CATCTAAAAAACGACCAAGACACCGCTAATACGACTTATCAAGGCTTATATGCGAAAGCCAGCAGTTTAGTTGCGCAAGT
AAGTGAAGCCGTTGCTTGGTTTGATCCCGAGTTATTGACGATGTCCGATGAAACGATTTGGGGCTATTTCGATCAAGAAC
CTAAGTTAGCAGTTTATCGTCATATGATCGAAAAAACCATCAACGAGCGGCCCCATGTTTTGCCTGCCGATCAAGAAGCG
TTATTGGCCGGTGCTGGCGAAATTTTTGGTGCCCCTGGCAATATTTTCTCTGTTTTAAACAATGCTGACTTGGATTTTCC
AGTCGTTGAAGACGAAAATGGGGAAAAAGTGCAGCTGTCACATGGTGTCTACGGTGAGTTGATGGAAAGTACAGATCGCT
CTGTTCGAGAAGCGGCCTTTAAAGGTCTCTATGGCGTCTATGAGCAATTCCGTAATACCTTTGCCCAAACCTTAAGTACG
AATATCAAAGCCCACAACTTTAAAGCCAAAGCCCGTAAATACGATTCCGCACGCCAAGCCGCTTTGAGTGCCAATCATAT
TCCTGAAAGTGTCTATGATACGTTAGTGGACGTCGTTAATCAACATTTGCCGTTACTACACCGTTATATGGCATTAAGAA
AACGCCTGTTGGCTGTCGACACACTTCATATGTATGATGTGTACACGCCGATTTTAGGGGAAGCACCGATTCGCTACACC
TATGAAGAAGCAGTCGAAAAAGCGAAAGAAGCGCTAAAACCATTAGGGGAAGAGTATCTCGCTGTAGTTGAAGAAGCCTT
CAGCAATCGGTGGATCGATGTCGCTGAAAACAAAGGCAAACGCAGTGGTGCCTATTCGTCAGGTGCTTATGACACGCTGC
CTTATATCTTAATGAACTGGAATGATCGATTGGATCAACTCTTCACCCTTGTTCATGAGATGGGGCACAGTGTGCATAGT
TATTTCACAAGGAATAACCAGCCTTATGCCTATGGCGATTATTCGATTTTCTTAGCAGAAATCGCTTCGACGACGAACGA
AAATATATTAACGGAATACATGCTTCAGACTGAGACTGATCCACGGGTCAAAGCCTATGTCTTGAATCATTTTCTTGATG
GCTTCAAAGGCACGATTTTCCGTCAAACGCAATTTGCCGAGTTCGAGCATTTCATGCACGTAGAAGATGCGAAAGGAACA
CCGTTGACCAGTGAATTCTTAAGCGAGAATTATGCCGAGTTAAATGCGAAATACTACGGACCATCAGTTGAAAAAGATCC
TGAGATTCGTCTCGAATGGTCACGAATCCCTCATTTCTATTACAATTACTATGTCTACCAATATTCAACTGGTTTTTCCG
CAGCTTCTGCTTTGGCGAAGAAAATCTTAGCTGGCGAACCGGATGCCTTAACCAACTATTTGAACTATTTGAAAGCCGGA
CGTAGTGATTATCCAATCGAAGTCATGAAAAAAGCAGGCGTCGATATGACGAAAGCAGATTATATTGAAGATGCGATGAA
AGTATTTGAGCAACGTTTGAATGAATTGGAAGCACTCGTTAAAGAAATCGAAGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(207-587)

Oligopeptidase F (Peptidase_M3_N)

(117-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.492

98.017

0.554

Multiple sequence alignment