Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   CO692_RS01115 Genome accession   NZ_CP023515
Coordinates   36532..38205 (-) Length   557 a.a.
NCBI ID   WP_096741303.1    Uniprot ID   A0A291DI36
Organism   Enterococcus sp. FDAARGOS_375     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 31532..43205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO692_RS01090 (CO692_01090) pstB 31729..32535 (-) 807 WP_005225783.1 phosphate ABC transporter ATP-binding protein PstB -
  CO692_RS01095 (CO692_01095) pstA 32549..33433 (-) 885 WP_077454323.1 phosphate ABC transporter permease PstA -
  CO692_RS01100 (CO692_01100) pstC 33433..34353 (-) 921 WP_077454324.1 phosphate ABC transporter permease subunit PstC -
  CO692_RS01105 (CO692_01105) - 34451..35305 (-) 855 WP_086292174.1 phosphate ABC transporter substrate-binding protein PstS -
  CO692_RS01110 (CO692_01110) - 35704..36435 (-) 732 WP_175632080.1 alpha/beta hydrolase -
  CO692_RS01115 (CO692_01115) recN 36532..38205 (-) 1674 WP_096741303.1 DNA repair protein RecN Machinery gene
  CO692_RS01120 (CO692_01120) argR 38221..38670 (-) 450 WP_005235362.1 arginine repressor -
  CO692_RS01125 (CO692_01125) - 38768..39589 (-) 822 WP_077454328.1 TlyA family RNA methyltransferase -
  CO692_RS01130 (CO692_01130) - 39586..40482 (-) 897 WP_096741304.1 polyprenyl synthetase family protein -
  CO692_RS01135 (CO692_01135) - 40479..40700 (-) 222 WP_005235356.1 exodeoxyribonuclease VII small subunit -
  CO692_RS01140 (CO692_01140) xseA 40681..42033 (-) 1353 WP_096741305.1 exodeoxyribonuclease VII large subunit -
  CO692_RS01145 (CO692_01145) - 42034..42885 (-) 852 WP_077454331.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62589.77 Da        Isoelectric Point: 4.5155

>NTDB_id=248023 CO692_RS01115 WP_096741303.1 36532..38205(-) (recN) [Enterococcus sp. FDAARGOS_375]
MLLELSIQNFAIISNLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGGRGSSDYLRQGAEKCRLEGIFEWPNQQEFKELT
ADLGIDEEEVLIVQRDISQSGKNICRVNGRTVTLSVLRQIGLFLVDIQGQNEHQELLQPEKHLALMDGFGDDSFKAELAD
YRQAYQSYCSLEKHVRTIQENEQLYVQRMDMLRFQQEEIAQAELMENEEELLIDEREKLTNYQKIVDALGQSYGALSAEE
VNSLDGVSVALSEIQSIAHLDPAYEKISEAIQSAYYLLQDAATDISRQVDNLELDEGRLEEVISRLETIRQLKRKYGESI
PVILAYYDEISKEISESAYTEGQLEQLEEELAQKAEAVWQLAEALHVKRRELAHRLEKEIVQELKELYMEHAQFEVRFAP
GSKQLSSSGFDTVEFYLTTNPGEGMKPLVRVASGGELSRILLALKSIFSRKQGITSIVFDEVDTGVSGRVAQAIAEKIAK
IAANSQVLCITHLPQVAAVADNQYFIEKAIQEGRTETHVRKLSKEERVAEIARMLSGAEITDLTIEHARELLALAHR

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=248023 CO692_RS01115 WP_096741303.1 36532..38205(-) (recN) [Enterococcus sp. FDAARGOS_375]
ATGCTTTTAGAATTGTCGATCCAAAATTTTGCGATTATTTCCAACTTGCACTTATCTTTCCATGAGGGAATGACGGCACT
GACAGGTGAGACAGGTGCCGGGAAATCAATTATTATCGATGCGATGGGTTTGCTAGCAGGCGGTAGAGGTTCCAGCGACT
ATTTGCGTCAAGGAGCAGAGAAATGTCGTTTAGAAGGGATCTTCGAATGGCCGAATCAGCAGGAGTTCAAAGAGTTGACC
GCAGATTTAGGTATTGATGAAGAAGAAGTTTTGATCGTACAACGAGATATCTCTCAATCGGGGAAAAATATTTGTCGTGT
CAATGGTCGAACCGTTACCTTGTCGGTTTTGCGTCAAATCGGTTTATTCTTAGTCGATATCCAAGGACAAAATGAGCATC
AAGAGCTGCTGCAACCGGAAAAACATTTGGCATTGATGGATGGATTTGGGGATGATAGCTTTAAAGCGGAACTTGCGGAT
TACCGTCAAGCCTATCAAAGCTATTGCTCCTTAGAAAAACATGTCCGAACCATTCAAGAAAATGAACAGCTCTATGTGCA
GCGAATGGACATGCTGCGTTTTCAACAAGAAGAGATCGCCCAAGCCGAATTGATGGAAAACGAAGAAGAACTGCTGATCG
ACGAACGGGAAAAACTCACGAACTATCAAAAAATCGTGGATGCCTTGGGACAAAGCTATGGTGCTCTATCAGCTGAGGAA
GTCAATAGTTTAGATGGGGTCAGTGTGGCATTGTCAGAGATCCAGTCGATCGCCCATCTTGATCCTGCGTATGAAAAAAT
CAGTGAAGCGATCCAAAGCGCGTATTACTTGTTGCAAGATGCAGCCACCGATATTTCGCGACAAGTCGACAACCTTGAAT
TAGATGAAGGCCGACTGGAAGAAGTCATTTCACGGCTGGAAACGATTCGTCAATTGAAGCGCAAATATGGGGAGTCGATT
CCTGTGATCCTAGCTTATTATGATGAGATCAGTAAAGAAATCAGCGAATCAGCCTATACGGAAGGTCAGTTGGAGCAATT
AGAAGAAGAGCTTGCCCAAAAAGCTGAAGCAGTTTGGCAGCTGGCGGAAGCCTTGCACGTCAAACGTCGTGAATTGGCTC
ATCGTTTAGAAAAAGAAATCGTTCAAGAGTTAAAAGAGCTGTATATGGAACACGCGCAGTTTGAAGTACGGTTCGCACCT
GGCTCAAAACAATTGAGTAGCAGCGGCTTTGATACTGTGGAGTTTTATCTGACCACCAACCCCGGTGAAGGCATGAAGCC
GTTAGTGCGGGTTGCTTCTGGGGGAGAACTTTCACGGATCTTACTGGCTCTCAAATCAATTTTCTCTCGGAAACAAGGAA
TCACCAGCATTGTCTTTGATGAAGTGGATACTGGGGTTAGTGGCCGAGTAGCTCAGGCGATCGCCGAAAAAATCGCCAAG
ATCGCAGCCAATTCGCAAGTTTTGTGTATCACTCACTTGCCGCAAGTAGCTGCTGTAGCGGATAATCAATATTTTATTGA
AAAAGCAATTCAAGAAGGACGGACGGAAACCCATGTCCGTAAACTATCTAAAGAAGAACGAGTGGCAGAGATTGCCCGTA
TGCTCTCAGGTGCAGAAATCACCGATTTAACGATCGAACATGCACGAGAACTATTGGCACTGGCACACCGATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A291DI36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

47.544

100

0.487

Multiple sequence alignment