Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   CO687_RS04985 Genome accession   NZ_CP023511
Coordinates   1005840..1007606 (+) Length   588 a.a.
NCBI ID   WP_061594155.1    Uniprot ID   A0AB35FU18
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1000840..1012606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS04960 (CO687_04960) - 1002415..1002939 (+) 525 WP_061596801.1 hypothetical protein -
  CO687_RS04965 (CO687_04965) scrK 1003180..1004079 (+) 900 WP_045773521.1 fructokinase ScrK -
  CO687_RS04970 (CO687_04970) - 1004128..1004538 (+) 411 WP_061596784.1 peptide deformylase -
  CO687_RS04975 (CO687_04975) - 1004548..1005117 (+) 570 WP_061596786.1 hypothetical protein -
  CO687_RS04980 (CO687_04980) - 1005389..1005847 (+) 459 WP_061594154.1 MarR family transcriptional regulator -
  CO687_RS04985 (CO687_04985) rcrP 1005840..1007606 (+) 1767 WP_061594155.1 ABC transporter ATP-binding protein Regulator
  CO687_RS04990 (CO687_04990) rcrQ 1007596..1009353 (+) 1758 WP_061594156.1 ABC transporter ATP-binding protein Regulator
  CO687_RS04995 (CO687_04995) manA 1009513..1010457 (+) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  CO687_RS05000 (CO687_05000) - 1010897..1012510 (+) 1614 WP_061594157.1 CTP synthase -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 64911.26 Da        Isoelectric Point: 5.3055

>NTDB_id=247967 CO687_RS04985 WP_061594155.1 1005840..1007606(+) (rcrP) [Streptococcus gordonii strain FDAARGOS_371]
MFKLFKRLTSKEIGLILMTVVFICLTVYLELEVPTYMSEITTLLQTPGTTTGDLWVPGLKMLGLSFASLFSLVIAGFVSS
RMASSYTTRLREDIFNRVLDYSDSEIKKFSIPSLLTRTTNDITQIQVFIAMGLQVVIRGSIMAIWAMTKVVGKSDAWLIA
VLVAVAAIILMTIVLVTLAFPKQSIVQTLTDKLNSVTRESLTGIRVVRAYNAEDYQDAKFGAANDEVTSLNIFINRFMSL
FNPIMSGISSGLTLAIYWIGAYLIHSAASADKLGLFSDMVVFMSYGMQVVIGFLLMGALFIVLPRTLVSAGRINKVLALD
SSIKEKDQAQTEGQSKGQVTFEDVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLVNLIPRFYDVTEGRILID
GVDVRDYELKALRNKVGYIPQKAVLFSGTIASNLDFGESMETPLDEEKMWEALELAQAKLFVEEKEAGLESEVAQGGTNY
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAEQTQHMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HKELLATNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=247967 CO687_RS04985 WP_061594155.1 1005840..1007606(+) (rcrP) [Streptococcus gordonii strain FDAARGOS_371]
ATGTTTAAATTATTTAAACGCTTGACGTCAAAAGAAATCGGCCTGATTTTGATGACAGTTGTTTTTATCTGTCTGACCGT
TTATCTAGAGTTAGAAGTTCCGACTTATATGTCAGAAATTACAACTTTACTACAGACACCGGGGACAACGACAGGAGATC
TATGGGTACCAGGTTTGAAAATGCTGGGCCTATCCTTTGCCAGCTTGTTCTCCTTGGTAATAGCTGGTTTTGTGTCCTCT
CGGATGGCTTCTAGCTATACTACCCGCTTGCGTGAGGATATTTTTAATCGTGTCTTGGATTATTCTGATTCAGAGATTAA
AAAATTCTCTATCCCTAGCCTTCTGACCAGAACAACCAACGATATTACCCAAATTCAGGTGTTTATCGCTATGGGATTAC
AAGTTGTTATTCGAGGAAGCATCATGGCTATTTGGGCTATGACGAAGGTTGTTGGCAAATCAGATGCTTGGTTGATCGCT
GTTTTAGTCGCGGTTGCAGCCATTATATTAATGACGATTGTCTTAGTGACTTTGGCTTTTCCAAAGCAATCTATTGTACA
AACCTTGACAGATAAATTAAATAGTGTGACACGTGAGAGTTTGACAGGGATTCGGGTTGTTCGGGCCTATAATGCAGAAG
ATTACCAGGATGCAAAATTTGGTGCAGCAAACGACGAGGTAACTAGCCTTAATATTTTTATTAACCGCTTCATGTCTTTG
TTCAATCCGATTATGAGCGGAATTTCAAGTGGTTTAACGCTGGCTATTTATTGGATTGGAGCTTATTTGATTCATAGCGC
AGCATCTGCTGATAAGCTTGGTCTATTCAGTGATATGGTTGTTTTCATGTCTTATGGTATGCAGGTTGTAATTGGCTTCT
TGCTGATGGGGGCTTTGTTTATTGTTTTACCACGTACCCTTGTTTCGGCTGGCCGGATTAACAAAGTGTTAGCACTGGAT
AGCAGTATCAAAGAAAAAGATCAAGCACAGACTGAGGGCCAAAGCAAAGGACAAGTAACTTTTGAAGATGTTTCTTTCCG
TTATGCAAAAAATTCTGAAGCAGTAATTGAGCATGTTAGTTTCACTGCTAAAGCTGGTGAAACAGTTGCCTTTATTGGAT
CTACTGGTTCAGGTAAATCAACCCTTGTCAATTTGATACCTCGTTTCTATGATGTGACAGAAGGTAGGATTTTGATCGAC
GGCGTAGACGTCCGTGACTATGAGCTTAAAGCACTACGGAATAAGGTAGGATATATTCCGCAGAAAGCTGTACTTTTCTC
AGGGACAATTGCTTCAAATTTGGACTTTGGAGAAAGCATGGAAACTCCACTAGATGAAGAGAAAATGTGGGAAGCCCTTG
AACTAGCACAAGCCAAATTATTTGTAGAAGAAAAAGAGGCAGGACTTGAATCTGAAGTAGCCCAAGGAGGCACGAACTAC
TCTGGCGGTCAACGCCAACGCCTGGCTATTGCGCGTGCATTGGCCCGTAAGCCGGAAATTTTGATATTTGATGATTCTTT
CTCTGCTTTGGACTATAAGACAGATCGTATTTTACGAAAAGAATTGGCAGAACAGACCCAACATATGACAAAACTGATTG
TCGCCCAACGAATTTCTACTATTATGGATGCCGATCAAATCCTAGTTCTAGACAATGGTAAAGTCGTTGGACAAGGTACC
CATAAAGAGTTGTTGGCTACGAATGAAGTGTACCAAGAAATTGCTTATTCTCAATTATCAAAGGAGGAACTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-285)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

69.5

100

0.709

Multiple sequence alignment