Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CO687_RS03795 | Genome accession | NZ_CP023511 |
| Coordinates | 779555..781984 (+) | Length | 809 a.a. |
| NCBI ID | WP_061582819.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain FDAARGOS_371 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 774555..786984
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO687_RS03775 (CO687_03775) | rpsB | 776411..777193 (+) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
| CO687_RS03780 (CO687_03780) | tsf | 777272..778315 (+) | 1044 | WP_008809923.1 | translation elongation factor Ts | - |
| CO687_RS03785 (CO687_03785) | - | 778421..778771 (-) | 351 | WP_008809922.1 | hypothetical protein | - |
| CO687_RS03790 (CO687_03790) | - | 779090..779548 (+) | 459 | WP_008809921.1 | CtsR family transcriptional regulator | - |
| CO687_RS03795 (CO687_03795) | clpC | 779555..781984 (+) | 2430 | WP_061582819.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| CO687_RS03800 (CO687_03800) | - | 782207..783265 (+) | 1059 | WP_061599161.1 | AAA family ATPase | - |
| CO687_RS03805 (CO687_03805) | pnuC | 783287..784102 (+) | 816 | WP_061599163.1 | nicotinamide riboside transporter PnuC | - |
| CO687_RS03810 (CO687_03810) | - | 784146..784934 (+) | 789 | WP_061582816.1 | NUDIX hydrolase | - |
| CO687_RS03815 (CO687_03815) | - | 785170..785844 (+) | 675 | WP_061599165.1 | DUF6287 domain-containing protein | - |
| CO687_RS03820 (CO687_03820) | dusB | 785883..786860 (-) | 978 | WP_008809915.1 | tRNA dihydrouridine synthase DusB | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90094.84 Da Isoelectric Point: 6.5943
>NTDB_id=247951 CO687_RS03795 WP_061582819.1 779555..781984(+) (clpC) [Streptococcus gordonii strain FDAARGOS_371]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHRVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHRVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
Nucleotide
Download Length: 2430 bp
>NTDB_id=247951 CO687_RS03795 WP_061582819.1 779555..781984(+) (clpC) [Streptococcus gordonii strain FDAARGOS_371]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCAATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCTTATACGCTATCATCAGCGACAGAGGAACCCTAGCAACTCGTATTTTAGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGGAGAAACCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGCTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTCGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCGCACGAACTAGCCAAAATGCGGGTTCTAGA
GCTTGATTTAATGAACGTTGTGGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATTGATGAACTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGACGCTTCGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAGGGTAACGATTACAGATCAAGCAATTGAAACA
GCTGTAAAATATGCTCATCGTTATTTGACAAGCAAGCATCTGCCGGATTCAGCAATAGATCTGTTAGATGAAGCTAGTGC
TACAGTGCGTAACAATGGTCCCCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAGCTTGGTCGCTTGATCAAGGAAGAAAATCAACCTCTATCAAGTAATTTGAAGGTAGAGGAAACAGATATTCTG
ACAACTCTCAGTCGCCTGTCTGGTATTCCAGTCCAAAAATTGACTCAGACAGATGCTAAAAAATATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGCCAAGATGAAGCTATATCAGCTATTAGTCGCGCAATTCGTCGTAATCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGTCCAACTGGGGTTGGTAAGACCGAGTTGGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCTAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACCGACCAT
ATTCCGTCCTCTTATTTGACGAAGTTGAAAAAGCCCATCCGGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTGACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGCAATCTAGGAGCAACCAG
TTTGCGTGATGATAAGACGGTCGGCTTTGGAGCGCGCGACATTCGCTTGGATCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCAGCAGAC
CATATGCAGGAGGTTGTCAAAGTGATGGTTAAACCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGATATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGGGATTTACAAGCTGGTCAGACTTTGAAAGTGGGGGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCAATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCTTATACGCTATCATCAGCGACAGAGGAACCCTAGCAACTCGTATTTTAGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGGAGAAACCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGCTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTCGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCGCACGAACTAGCCAAAATGCGGGTTCTAGA
GCTTGATTTAATGAACGTTGTGGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATTGATGAACTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGACGCTTCGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAGGGTAACGATTACAGATCAAGCAATTGAAACA
GCTGTAAAATATGCTCATCGTTATTTGACAAGCAAGCATCTGCCGGATTCAGCAATAGATCTGTTAGATGAAGCTAGTGC
TACAGTGCGTAACAATGGTCCCCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAGCTTGGTCGCTTGATCAAGGAAGAAAATCAACCTCTATCAAGTAATTTGAAGGTAGAGGAAACAGATATTCTG
ACAACTCTCAGTCGCCTGTCTGGTATTCCAGTCCAAAAATTGACTCAGACAGATGCTAAAAAATATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGCCAAGATGAAGCTATATCAGCTATTAGTCGCGCAATTCGTCGTAATCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGTCCAACTGGGGTTGGTAAGACCGAGTTGGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCTAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACCGACCAT
ATTCCGTCCTCTTATTTGACGAAGTTGAAAAAGCCCATCCGGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTGACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGCAATCTAGGAGCAACCAG
TTTGCGTGATGATAAGACGGTCGGCTTTGGAGCGCGCGACATTCGCTTGGATCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCAGCAGAC
CATATGCAGGAGGTTGTCAAAGTGATGGTTAAACCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGATATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGGGATTTACAAGCTGGTCAGACTTTGAAAGTGGGGGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
78.545 |
100 |
0.787 |
| clpC | Streptococcus pneumoniae Rx1 |
78.545 |
100 |
0.787 |
| clpC | Streptococcus pneumoniae D39 |
78.545 |
100 |
0.787 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.422 |
100 |
0.67 |
| clpC | Streptococcus mutans UA159 |
67.75 |
98.888 |
0.67 |
| clpC | Streptococcus thermophilus LMD-9 |
66.299 |
100 |
0.669 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.626 |
100 |
0.503 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.181 |
100 |
0.464 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus mutans UA159 |
47.436 |
77.132 |
0.366 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.613 |
81.459 |
0.363 |