Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   CO686_RS07930 Genome accession   NZ_CP023507
Coordinates   1622177..1623946 (-) Length   589 a.a.
NCBI ID   WP_049500047.1    Uniprot ID   A0AAW7WAS1
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1617177..1628946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS07900 (CO686_07900) - 1617970..1618293 (-) 324 Protein_1503 LPXTG cell wall anchor domain-containing protein -
  CO686_RS07905 (CO686_07905) rpmB 1618294..1618482 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  CO686_RS07910 (CO686_07910) - 1618587..1619261 (-) 675 WP_096753702.1 hypothetical protein -
  CO686_RS07915 (CO686_07915) - 1619267..1619713 (-) 447 WP_000776583.1 LytTR family DNA-binding domain-containing protein -
  CO686_RS07920 (CO686_07920) - 1619827..1620330 (-) 504 WP_070799925.1 phosphatase PAP2 family protein -
  CO686_RS07925 (CO686_07925) rcrQ 1620427..1622187 (-) 1761 WP_096753703.1 ABC transporter ATP-binding protein Regulator
  CO686_RS07930 (CO686_07930) rcrP 1622177..1623946 (-) 1770 WP_049500047.1 ABC transporter ATP-binding protein Regulator
  CO686_RS07935 (CO686_07935) - 1623930..1624391 (-) 462 WP_049500046.1 MarR family winged helix-turn-helix transcriptional regulator -
  CO686_RS07940 (CO686_07940) - 1624584..1625288 (+) 705 WP_096753704.1 DUF308 domain-containing protein -
  CO686_RS07945 (CO686_07945) - 1625336..1626052 (-) 717 WP_000532893.1 YebC/PmpR family DNA-binding transcriptional regulator -
  CO686_RS07950 (CO686_07950) - 1626149..1627519 (-) 1371 WP_096753705.1 MATE family efflux transporter -
  CO686_RS07955 (CO686_07955) - 1627629..1628183 (+) 555 WP_001054828.1 GNAT family N-acetyltransferase -
  CO686_RS07960 (CO686_07960) - 1628315..1628509 (-) 195 WP_000415527.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65292.67 Da        Isoelectric Point: 6.6270

>NTDB_id=247876 CO686_RS07930 WP_049500047.1 1622177..1623946(-) (rcrP) [Streptococcus oralis strain FDAARGOS_367]
MKKLAKRITGKEWGMIALTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSIMVGFFAA
RVAASYTTHLRTDVFHQVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLAERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGQILV
DGVNVQDYNLEDLRNKVGYIPQKAVLFSGNVKGNLDFGKSKETPLSEAAMWQALELAQSKSFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQELAEKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=247876 CO686_RS07930 WP_049500047.1 1622177..1623946(-) (rcrP) [Streptococcus oralis strain FDAARGOS_367]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATCGCCCTTACGATTCTTTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACTTATATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAATTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTATTATGGTTGGTTTCTTTGCTGCT
CGCGTTGCAGCATCCTATACAACTCATCTACGCACTGACGTATTTCATCAGGTTTTGGATTTTTCACAGACAGAAATCAA
GCGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATCACACAGGTACAGATGCTCTTTACCATGGGCTTGC
AAGTGGTTACTCGTGGGCCAATCATGGCAATCTGGGCTATTGGAAAAATCCTTGGGAAATCGGAATACTGGCTCTGGGCG
GTCGTTGTGGCTGTTATTGTCAATGTCTTGATGACAACCGTTCTTATGACTCTGGCCTTTCCTAAACAATCGGTCATCCA
AAAATTGACAGATAAACTCAATAGCATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTTCGCGCATACAATGCCGAGG
ATTACCAAGATAAGAAATTTGAAGCAGCCAACGATGAGGTAACACGTCTCAATCTCTTTGTCAATCGATTGATGGCCATT
ATGAATCCCATTATGATGGCGATTTCCAGTGGACTAAGTTTAGCTATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGGCAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATTTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGCTACTCTAAAAACTCAGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTCATCG
GATCGACTGGATCAGGAAAGTCCACCCTAGTCAACCTTTTGCCACGTTTTTACGACGTTTCAGATGGACAAATCCTAGTG
GATGGTGTCAATGTACAAGATTACAATTTGGAAGATTTGCGCAATAAGGTCGGCTATATTCCACAAAAAGCTGTACTCTT
TTCTGGAAATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAGGCTGCTATGTGGCAAGCCT
TGGAATTGGCCCAGTCTAAAAGCTTTATCGAGGACAAGGAAGCAGGACTTGCATCAGAAGTGGCCCAAGGCGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAGCCTGAAATCCTCATTTTTGATGATTC
CTTCTCGGCCTTGGACTACAAGACAGACCGGATCTTGCGCCAAGAACTTGCTGAAAAAACACAATCTATGACCAAGCTCA
TCGTAGCGCAACGGATTTCTACTATTATGGATGCTGACCTAATCTTAGTATTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-292)

ABC transporter (ABC_tran)

(358-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.058

100

0.664

Multiple sequence alignment