Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CO686_RS07925 Genome accession   NZ_CP023507
Coordinates   1620427..1622187 (-) Length   586 a.a.
NCBI ID   WP_096753703.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1615427..1627187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS07900 (CO686_07900) - 1617970..1618293 (-) 324 Protein_1503 LPXTG cell wall anchor domain-containing protein -
  CO686_RS07905 (CO686_07905) rpmB 1618294..1618482 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  CO686_RS07910 (CO686_07910) - 1618587..1619261 (-) 675 WP_096753702.1 hypothetical protein -
  CO686_RS07915 (CO686_07915) - 1619267..1619713 (-) 447 WP_000776583.1 LytTR family DNA-binding domain-containing protein -
  CO686_RS07920 (CO686_07920) - 1619827..1620330 (-) 504 WP_070799925.1 phosphatase PAP2 family protein -
  CO686_RS07925 (CO686_07925) rcrQ 1620427..1622187 (-) 1761 WP_096753703.1 ABC transporter ATP-binding protein Regulator
  CO686_RS07930 (CO686_07930) rcrP 1622177..1623946 (-) 1770 WP_049500047.1 ABC transporter ATP-binding protein Regulator
  CO686_RS07935 (CO686_07935) - 1623930..1624391 (-) 462 WP_049500046.1 MarR family winged helix-turn-helix transcriptional regulator -
  CO686_RS07940 (CO686_07940) - 1624584..1625288 (+) 705 WP_096753704.1 DUF308 domain-containing protein -
  CO686_RS07945 (CO686_07945) - 1625336..1626052 (-) 717 WP_000532893.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64615.38 Da        Isoelectric Point: 5.3150

>NTDB_id=247875 CO686_RS07925 WP_096753703.1 1620427..1622187(-) (rcrQ) [Streptococcus oralis strain FDAARGOS_367]
MENKKVSVWKQCKPYMAGLQLPLLLAVVAAVISSIITVYGPTKIKEITNLISDGLMTGIDLEAVSSIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLAHMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMGQAGFYADLYNSQFTEDQAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=247875 CO686_RS07925 WP_096753703.1 1620427..1622187(-) (rcrQ) [Streptococcus oralis strain FDAARGOS_367]
ATGGAAAATAAAAAAGTGTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTACTAGCAGT
TGTGGCTGCAGTCATTTCAAGCATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACAAACTTGATTTCAGATG
GTTTGATGACTGGAATTGATTTAGAGGCTGTGTCAAGTATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGCGCCATC
CTTAACTATACACAGGCCTATATCTTTTCAACGAGCATTCAGCATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
AATCAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTGGCATTGGTAACAGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCTGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCTCAGCAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCAGTGGACACCTCCAAAGCGAGATTTGCAGGGTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGGGCCGCGCTGGCGTTAGAAGGGCATATCACTATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCTCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCTTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCTGAGATGCAGGATGAATCTCATAAGGAAAGACAATTGGCCCATATGAAAGGGGAAGTAGTCTTTGA
TCATGTGTCCTTTGGCTATACACCAGAGCGCACCATCATCCATGACTTTTCTGCGACGGCTCATGCAGGTCAAAAGGTCG
CAATCGTTGGACCGACTGGAGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGCATCGATGGCGTGGATACCAAGGATATGAAGCGTTCGGAAGTACACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACGATTCGAGAGAACCTGATATATAATCAGACAGACATCAGTGATGAACGAATGATGGAAGCCA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACTTTGCCAGACGGTTACGACACCGTTTTGGATGACACTGTGACCTTG
TCTGTTGGGCAAAAACAACTCTTGACCATTGCTCGTGCTTTGCTGAAGGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTTGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAGGGTAGAACCTCCTTTGTCA
TTGCCCACCGCTTGTCAACCATCCGTAATGCAGATTTGATCTTGGTCATGAAAGATGGTAATATCATCGAGCAAGGAAAT
CATGAGGAATTGATGGGCCAAGCTGGCTTCTATGCGGATCTCTACAACAGCCAATTCACAGAAGACCAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666

Multiple sequence alignment