Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   CO686_RS07065 Genome accession   NZ_CP023507
Coordinates   1423909..1424202 (-) Length   97 a.a.
NCBI ID   WP_000797736.1    Uniprot ID   A0A081R2L0
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1418909..1429202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS07055 (CO686_07055) metF 1420345..1421211 (-) 867 WP_061421607.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  CO686_RS07060 (CO686_07060) metE 1421306..1423555 (-) 2250 WP_096753654.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  CO686_RS07065 (CO686_07065) HI0659 1423909..1424202 (-) 294 WP_000797736.1 helix-turn-helix transcriptional regulator Machinery gene
  CO686_RS07070 (CO686_07070) - 1424192..1424557 (-) 366 WP_042902787.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CO686_RS07075 (CO686_07075) - 1424714..1425079 (-) 366 WP_049501081.1 TIGR02328 family protein -
  CO686_RS07080 (CO686_07080) - 1425063..1425467 (-) 405 WP_096753655.1 YbgA family protein -
  CO686_RS07085 (CO686_07085) - 1425598..1426683 (-) 1086 WP_096753656.1 HigA family addiction module antitoxin -
  CO686_RS07090 (CO686_07090) - 1426676..1427014 (-) 339 WP_096753657.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CO686_RS07095 (CO686_07095) - 1427146..1428747 (-) 1602 WP_096753658.1 type I restriction-modification system subunit M -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10752.41 Da        Isoelectric Point: 5.1991

>NTDB_id=247868 CO686_RS07065 WP_000797736.1 1423909..1424202(-) (HI0659) [Streptococcus oralis strain FDAARGOS_367]
MKNSAIGSNWKDIRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=247868 CO686_RS07065 WP_000797736.1 1423909..1424202(-) (HI0659) [Streptococcus oralis strain FDAARGOS_367]
ATGAAGAATAGTGCTATTGGAAGTAATTGGAAAGATATCCGATCTGAACTCTTTACCAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTGGCTATCATGAGTGAGTTGATAGAAGCTAGACATGAGCAAGGTATTAGTCAGAAAAAGCTAGAAGAACTCA
GTGGAGTAAGCCAGCCTGTCATAGCTAGAATGGAAACAGGAAAGACCAGTCCTCAGTTGGATACAGTCTTGAAAGTCTTA
GCCAGTTTAGGAAAGACACTAGCAGTCGTCCCACTTGAACAGGAAAAAAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A081R2L0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment