Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CO686_RS01170 Genome accession   NZ_CP023507
Coordinates   241001..241732 (+) Length   243 a.a.
NCBI ID   WP_049550485.1    Uniprot ID   A0AAW7WB27
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 236001..246732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS01140 (CO686_01140) - 237451..238083 (+) 633 WP_000756344.1 DJ-1/PfpI family protein -
  CO686_RS01150 (CO686_01150) dnaJ 238298..239434 (+) 1137 WP_049500972.1 molecular chaperone DnaJ -
  CO686_RS01155 (CO686_01155) - 239512..240165 (-) 654 WP_049520672.1 hypothetical protein -
  CO686_RS01160 (CO686_01160) - 240235..240513 (-) 279 WP_049520671.1 hypothetical protein -
  CO686_RS01165 (CO686_01165) - 240523..240933 (-) 411 WP_049520670.1 HIT family protein -
  CO686_RS01170 (CO686_01170) pptA 241001..241732 (+) 732 WP_049550485.1 ABC transporter ATP-binding protein Regulator
  CO686_RS01175 (CO686_01175) - 241729..242778 (+) 1050 WP_049550484.1 ABC transporter permease -
  CO686_RS01180 (CO686_01180) ccrZ 242826..243620 (+) 795 WP_049550483.1 cell cycle regulator CcrZ -
  CO686_RS01185 (CO686_01185) trmB 243617..244252 (+) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CO686_RS01190 (CO686_01190) rimP 244379..244858 (+) 480 WP_000338696.1 ribosome maturation factor RimP -
  CO686_RS01195 (CO686_01195) nusA 244901..246037 (+) 1137 WP_049550482.1 transcription termination factor NusA -
  CO686_RS01200 (CO686_01200) - 246059..246352 (+) 294 WP_000857568.1 YlxR family protein -
  CO686_RS01205 (CO686_01205) - 246345..246644 (+) 300 WP_001041395.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27125.61 Da        Isoelectric Point: 4.9996

>NTDB_id=247844 CO686_RS01170 WP_049550485.1 241001..241732(+) (pptA) [Streptococcus oralis strain FDAARGOS_367]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLRKDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGVDQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
GDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=247844 CO686_RS01170 WP_049550485.1 241001..241732(+) (pptA) [Streptococcus oralis strain FDAARGOS_367]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTTGGTTTGATTGGTCTTAACGGAGCGGGTAAATCAACGACGATTAATGAAATTATCGGTCTTTTGACGCCTT
ATAGTGGAGAGATTAAGATTAACGGTCTAACCCTGCGAAAAGATGCGACCAACTACCGCAAGCAGATTGGCTACATCCCG
GAAACGCCTAGCTTGTATGAGGAATTGACTCTCAGAGAGCATATCGAAACAGTGGCTATGGCTTATGGTGTCGATCAGAA
AGTGGCCTTTGATCGTGTGGAACCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGACTGGTTCCCAGTGCATTTCT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTCGTAGATCCGAGCCTTTTCATCGTTGATGAGCCTTTC
CTTGGGCTCGATCCGCTGGCCATTTCTGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAAGGCAAGTCCATTCTCAT
GAGTACCCATGTTTTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTTATTCTCCACAAGGGGGAGGTGCGGGCTCAGG
GCAACCTCCAGCAACTCCGCGAGGCCTTTGACATGCCCGAGGCTAGCTTGAACGACATTTATTTGGCTCTAACCAAAGAG
GGGGACCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.222

98.354

0.72
  pptA Streptococcus thermophilus LMD-9

72.385

98.354

0.712

Multiple sequence alignment