Detailed information NTG0247606

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC71_RS01335
• Genome accession: NZ_CP023485
• Coordinates: 262807..263814 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FORC_071
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 257807..268814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC71_RS01305 (FORC71_0235)	zapB	257976..258218 (+)	243	WP_005481417.1	cell division protein ZapB	-
FORC71_RS01310 (FORC71_0236)	rraA	258323..258835 (-)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
FORC71_RS01315 (FORC71_0237)	-	258912..259829 (-)	918	WP_017449001.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC71_RS01320 (FORC71_0238)	hslU	260014..261345 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
FORC71_RS01325 (FORC71_0239)	hslV	261369..261920 (-)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
FORC71_RS01330 (FORC71_0240)	ftsN	262085..262630 (-)	546	WP_005481405.1	cell division protein FtsN	-
FORC71_RS01335 (FORC71_0241)	cytR	262807..263814 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
FORC71_RS01340 (FORC71_0242)	priA	264147..266351 (-)	2205	WP_065779579.1	primosomal protein N'	-
FORC71_RS01350 (FORC71_0243)	rpmE	266646..266867 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
FORC71_RS01355 (FORC71_0244)	rpsJ	267325..267636 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
FORC71_RS01360 (FORC71_0245)	rplC	267651..268280 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=247606 FORC71_RS01335 WP_005481416.1 262807..263814(-) (cytR) [Vibrio parahaemolyticus strain FORC_071]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=247606 FORC71_RS01335 WP_005481416.1 262807..263814(-) (cytR) [Vibrio parahaemolyticus strain FORC_071]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCATTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904