Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   COP00_RS22780 Genome accession   NZ_CP023481
Coordinates   4346843..4347031 (+) Length   62 a.a.
NCBI ID   WP_048355078.1    Uniprot ID   A0A0J6ENC5
Organism   Bacillus glycinifermentans strain KBN06P03352     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4341843..4352031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  COP00_RS22750 (COP00_22750) argF 4342711..4343649 (+) 939 WP_048355077.1 ornithine carbamoyltransferase -
  COP00_RS22755 (COP00_22755) - 4343752..4343931 (+) 180 WP_048355076.1 YjzC family protein -
  COP00_RS22760 (COP00_22760) - 4343966..4344151 (-) 186 WP_046131233.1 YjzD family protein -
  COP00_RS22765 (COP00_22765) - 4344388..4345122 (+) 735 WP_048355075.1 hypothetical protein -
  COP00_RS22770 (COP00_22770) - 4345216..4345791 (+) 576 WP_048355074.1 hypothetical protein -
  COP00_RS22775 (COP00_22775) med 4345878..4346837 (+) 960 WP_048355073.1 BMP family ABC transporter substrate-binding protein Regulator
  COP00_RS22780 (COP00_22780) comZ 4346843..4347031 (+) 189 WP_048355078.1 ComZ family protein Regulator
  COP00_RS22785 (COP00_22785) - 4347076..4347324 (-) 249 WP_048355072.1 hypothetical protein -
  COP00_RS22790 (COP00_22790) - 4347492..4348430 (+) 939 WP_048355071.1 beta-ketoacyl-ACP synthase III -
  COP00_RS22795 (COP00_22795) fabF 4348452..4349690 (+) 1239 WP_048355070.1 beta-ketoacyl-ACP synthase II -
  COP00_RS22800 (COP00_22800) - 4349775..4350563 (+) 789 WP_048355069.1 DUF2268 domain-containing protein -
  COP00_RS22805 (COP00_22805) - 4350745..4351719 (+) 975 WP_048355068.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7015.14 Da        Isoelectric Point: 4.2564

>NTDB_id=247541 COP00_RS22780 WP_048355078.1 4346843..4347031(+) (comZ) [Bacillus glycinifermentans strain KBN06P03352]
MQHEKSMEFLQIAMKYIPEAKEEMEKAGIELSPEMLQPFMTLFTKVMAEAYELGKADAGSGE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=247541 COP00_RS22780 WP_048355078.1 4346843..4347031(+) (comZ) [Bacillus glycinifermentans strain KBN06P03352]
GTGCAGCACGAAAAATCGATGGAATTTCTGCAAATTGCCATGAAATACATACCGGAAGCAAAGGAAGAGATGGAGAAAGC
GGGAATCGAGCTTTCCCCCGAGATGCTTCAGCCGTTTATGACATTGTTTACAAAGGTCATGGCAGAAGCATACGAGCTCG
GCAAAGCGGATGCAGGGTCAGGCGAGTAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J6ENC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

80

96.774

0.774

Multiple sequence alignment