Detailed information NTG0247483

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: COP00_RS00500
• Genome accession: NZ_CP023481
• Coordinates: 94906..95193 (+)
• Length: 95 a.a.
• NCBI ID: WP_048353068.1
• Uniprot ID: A0A0J6ETI4
• Organism: Bacillus glycinifermentans strain KBN06P03352
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 89906..100193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
COP00_RS00480 (COP00_00480)	-	90000..91619 (+)	1620	WP_046132242.1	ABC-F family ATP-binding cassette domain-containing protein	-
COP00_RS00485 (COP00_00485)	-	92063..93295 (-)	1233	WP_048353066.1	aminopeptidase	-
COP00_RS00490 (COP00_00490)	-	93385..93516 (-)	132	WP_096891714.1	protein YkpC	-
COP00_RS00495 (COP00_00495)	mreBH	93590..94597 (-)	1008	WP_048353067.1	rod-share determining protein MreBH	-
COP00_RS00500 (COP00_00500)	abrB	94906..95193 (+)	288	WP_048353068.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
COP00_RS00505 (COP00_00505)	-	95383..96705 (+)	1323	WP_048406291.1	ATP-binding protein	-
COP00_RS00510 (COP00_00510)	-	96792..97457 (+)	666	WP_048353069.1	potassium channel family protein	-
COP00_RS00515 (COP00_00515)	ade	97581..99299 (+)	1719	WP_048353070.1	adenine deaminase	-

Sequence

Protein

• Length: 95 a.a.
• Molecular weight: 10647.48 Da
• Isoelectric Point: 8.9087

>NTDB_id=247483 COP00_RS00500 WP_048353068.1 94906..95193(+) (abrB) [Bacillus glycinifermentans strain KBN06P03352]
MKSIGVVRKVDELGRIVMPIELRRALDISIKDSIEFFVDKDKIVLKKYKPYGVCLITGEITSENREYGNGNITLSPDGAK
LLLEELKSALHQAKS

Nucleotide

• Length: 288 bp

>NTDB_id=247483 COP00_RS00500 WP_048353068.1 94906..95193(+) (abrB) [Bacillus glycinifermentans strain KBN06P03352]
TTGAAATCCATAGGAGTTGTGAGAAAAGTAGATGAACTCGGCCGCATTGTGATGCCGATTGAATTGAGAAGGGCGCTCGA
TATCTCAATTAAGGACAGCATTGAATTCTTCGTTGACAAGGATAAAATCGTTTTGAAAAAATATAAACCTTACGGCGTTT
GTCTGATAACCGGAGAGATTACATCGGAAAACCGCGAATACGGAAACGGAAACATTACGCTCAGCCCGGATGGCGCCAAA
TTGCTTTTGGAAGAACTCAAAAGCGCGCTGCACCAGGCCAAATCGTAA

Domains

Predicted by InterproScan.

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-49)

• AbrB C-terminal domain (AbrB_C) (53-88)

3D structure

• AlphaFold DB: A0A0J6ETI4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	51.064	98.947	0.505