Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   COP00_RS00370 Genome accession   NZ_CP023481
Coordinates   69806..70390 (+) Length   194 a.a.
NCBI ID   WP_048353049.1    Uniprot ID   A0A0J6EYU0
Organism   Bacillus glycinifermentans strain KBN06P03352     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 64806..75390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  COP00_RS00340 (COP00_00340) - 65168..65620 (+) 453 WP_048353045.1 flavodoxin -
  COP00_RS00345 (COP00_00345) dapD 65729..66439 (+) 711 WP_057957607.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  COP00_RS00350 (COP00_00350) - 66508..67632 (+) 1125 WP_048353046.1 N-acetyldiaminopimelate deacetylase -
  COP00_RS00355 (COP00_00355) - 67698..67943 (+) 246 WP_048353047.1 YkuS family protein -
  COP00_RS00360 (COP00_00360) ahpA 68169..68711 (+) 543 WP_048353048.1 biofilm-specific peroxidase AhpA -
  COP00_RS00365 (COP00_00365) - 68799..69257 (+) 459 WP_057957606.1 TlpA family protein disulfide reductase -
  COP00_RS00370 (COP00_00370) rok 69806..70390 (+) 585 WP_048353049.1 transcriptional regulator Rok Regulator
  COP00_RS00375 (COP00_00375) - 70525..71481 (-) 957 WP_048353050.1 hypothetical protein -
  COP00_RS00380 (COP00_00380) - 71634..72221 (+) 588 WP_048353051.1 molybdenum cofactor guanylyltransferase -
  COP00_RS00385 (COP00_00385) - 72340..73352 (+) 1013 Protein_83 MoeB/ThiF family adenylyltransferase -
  COP00_RS00390 (COP00_00390) glp 73371..74663 (+) 1293 WP_048353053.1 gephyrin-like molybdotransferase Glp -
  COP00_RS00395 (COP00_00395) mobB 74630..75166 (+) 537 WP_048353054.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22390.41 Da        Isoelectric Point: 10.0936

>NTDB_id=247482 COP00_RS00370 WP_048353049.1 69806..70390(+) (rok) [Bacillus glycinifermentans strain KBN06P03352]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNNDTKKDFRTERKTESLPVLAELAAQEMKSYQQQ
QMQTSQKTQQQTSPQASALPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMT
TFMQSLIKMYPEVKKPYRGQYILEGDISTETEKQ

Nucleotide


Download         Length: 585 bp        

>NTDB_id=247482 COP00_RS00370 WP_048353049.1 69806..70390(+) (rok) [Bacillus glycinifermentans strain KBN06P03352]
ATGTTTAACGAGAGGGAAGCATTGCGTTTACGATTGGAGCAGCTAAATGAAGCTGAGGTTAAGGTCATTAGGGAGTATCA
AATTGAGCGTGACAATATATATGCAAAGCTGCGTGAATTGGATCGCCCATCCAGCTTTAATAACGATACAAAAAAAGATT
TTCGCACAGAGCGAAAAACCGAATCGCTCCCTGTTTTAGCTGAATTAGCTGCACAGGAGATGAAAAGCTATCAGCAGCAA
CAAATGCAGACATCTCAAAAAACTCAGCAGCAGACTTCTCCGCAAGCCTCCGCACTGCCTGCCGGAATTCCAGACGGTAC
AACGCGGCGCAGAAGGGGGACGGCACGTCCGGGTTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACGTTGAAGC
GTCACAATGCGGCGATCAAAAGCTCCGAACTTCAAAAAGAAATTGAAAAAGAAAGCGGGCTTGAAATTCCGAATATGACA
ACCTTCATGCAAAGTCTTATTAAAATGTATCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGAGACAT
CTCTACCGAAACAGAAAAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J6EYU0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.598

97.423

0.814

Multiple sequence alignment