Detailed information NTG0247447

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: CO204_RS09265
• Genome accession: NZ_CP023477
• Coordinates: 1831667..1832719 (-)
• Length: 350 a.a.
• NCBI ID: WP_002268461.1
• Uniprot ID: A0AAX1K1R1
• Organism: Streptococcus mutans strain LAR01
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1826667..1837719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO204_RS09245 (CO204_09200)	ptcA	1827062..1828081 (-)	1020	WP_019313047.1	putrescine carbamoyltransferase	-
CO204_RS09250 (CO204_09205)	-	1828320..1829285 (+)	966	WP_002263993.1	LuxR C-terminal-related transcriptional regulator	-
CO204_RS09255 (CO204_09210)	-	1829502..1830104 (-)	603	WP_002269742.1	nitroreductase family protein	-
CO204_RS09260 (CO204_09215)	amiF	1830748..1831674 (-)	927	WP_002267002.1	ABC transporter ATP-binding protein	Regulator
CO204_RS09265 (CO204_09220)	oppD	1831667..1832719 (-)	1053	WP_002268461.1	ABC transporter ATP-binding protein	Regulator
CO204_RS09270 (CO204_09225)	-	1832729..1833760 (-)	1032	WP_002263989.1	ABC transporter permease	-
CO204_RS09275 (CO204_09230)	-	1833771..1834685 (-)	915	WP_002262739.1	ABC transporter permease	-
CO204_RS09280 (CO204_09235)	-	1834791..1836440 (-)	1650	WP_002262740.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 39204.71 Da
• Isoelectric Point: 5.5768

>NTDB_id=247447 CO204_RS09265 WP_002268461.1 1831667..1832719(-) (oppD) [Streptococcus mutans strain LAR01]
MSKEKILQVNNLHVNFHTYAGEVKAIRDVSFYLEKGETLAIVGESGSGKSVTTRTLMGLSAKNAEIFGDIEFKGRNLNDL
KEEDWVHIRGNDISMIFQDPMTSLDPTMRIGLQIAEPIIKHEKVTKKEALKRALDMMEKVGIPNAQEHINDYPHQWSGGM
RQRAVIAIALATNPEILIADEPTTALDVTIQAQILHLMKEIQKNTDSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTNTASGSLHSIPGTPPDLLQPPQGDAFAPRNEFALDIDLKEEPPFFKVSDSHYAATWLL
DDRAPKITPPERILQRWEKWKSLQGEKHND

Nucleotide

• Length: 1053 bp

>NTDB_id=247447 CO204_RS09265 WP_002268461.1 1831667..1832719(-) (oppD) [Streptococcus mutans strain LAR01]
ATGAGTAAGGAAAAAATTTTACAAGTCAATAACCTCCATGTCAATTTTCATACCTATGCAGGTGAAGTAAAAGCTATTCG
CGATGTTAGTTTTTATTTAGAAAAAGGGGAAACGCTGGCTATTGTTGGCGAATCTGGTTCTGGAAAGTCGGTGACCACAC
GAACTTTAATGGGGTTGTCAGCAAAGAATGCTGAGATTTTCGGAGATATTGAGTTTAAGGGACGCAATCTAAATGATTTG
AAGGAAGAAGACTGGGTTCATATTCGCGGAAATGATATTTCCATGATTTTCCAAGATCCTATGACAAGTTTGGATCCAAC
CATGCGTATTGGCCTTCAAATTGCTGAACCTATTATCAAGCATGAAAAAGTAACTAAAAAAGAAGCTCTTAAGCGGGCTC
TTGACATGATGGAAAAGGTTGGTATTCCCAATGCGCAAGAACACATCAACGATTATCCTCATCAGTGGTCAGGCGGCATG
CGCCAGCGCGCTGTCATAGCTATTGCTTTGGCAACTAATCCTGAAATCCTTATTGCAGATGAACCAACGACGGCTCTTGA
TGTTACCATTCAAGCACAAATTCTTCATTTAATGAAAGAAATCCAAAAGAATACTGACTCTTCCATTATCTTTATCACTC
ATGATTTGGGTGTCGTTGCAGGTATGGCAGACCGTGTTGCTGTTATGTATGCAGGCAAGATTGTGGAATATGGTACAGTA
GATGAGGTTTTCTACAACCCACAGCATCCCTACACTTGGGGGCTTCTCAATTCGATGCCTACAACTAATACAGCTTCAGG
CAGTTTGCATTCAATTCCCGGAACACCGCCTGACTTGTTGCAGCCCCCTCAAGGAGATGCTTTTGCTCCAAGAAATGAAT
TCGCTCTTGATATTGATCTTAAGGAGGAGCCGCCATTTTTTAAAGTTAGTGATTCACATTATGCTGCTACTTGGCTGTTA
GATGATCGTGCTCCTAAGATTACTCCGCCGGAAAGAATTTTGCAGCGTTGGGAAAAATGGAAGAGCTTACAGGGAGAAAA
GCATAATGACTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	99.429	100	0.994
amiE	Streptococcus salivarius strain HSISS4	55.014	99.714	0.549
amiE	Streptococcus thermophilus LMG 18311	54.728	99.714	0.546
amiE	Streptococcus thermophilus LMD-9	54.728	99.714	0.546