Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   CO204_RS07805 Genome accession   NZ_CP023477
Coordinates   1538730..1539770 (-) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans strain LAR01     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1533730..1544770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO204_RS07785 (CO204_07750) - 1535163..1535699 (-) 537 WP_002262043.1 VanZ family protein -
  CO204_RS07790 (CO204_07755) rlmN 1535699..1536784 (-) 1086 WP_106006803.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  CO204_RS07795 (CO204_07760) - 1536781..1537329 (-) 549 WP_002268848.1 YutD-like domain-containing protein -
  CO204_RS07800 (CO204_07765) - 1537326..1538657 (-) 1332 WP_002264422.1 metallophosphoesterase -
  CO204_RS07805 (CO204_07770) sepM 1538730..1539770 (-) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  CO204_RS07810 (CO204_07775) coaD 1539748..1540248 (-) 501 WP_002264419.1 pantetheine-phosphate adenylyltransferase -
  CO204_RS07815 (CO204_07780) rsmD 1540238..1540777 (-) 540 WP_002264418.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  CO204_RS07820 (CO204_07785) - 1541360..1543135 (-) 1776 WP_019313107.1 oleate hydratase -
  CO204_RS07825 (CO204_07790) - 1543256..1543822 (-) 567 WP_002279620.1 TetR/AcrR family transcriptional regulator -
  CO204_RS10885 - 1543916..1544036 (+) 121 Protein_1475 IS982 family transposase -
  CO204_RS07830 (CO204_07795) - 1544018..1544263 (-) 246 WP_002268902.1 hypothetical protein -
  CO204_RS07835 (CO204_07800) - 1544304..1544507 (-) 204 WP_002270141.1 hypothetical protein -

Sequence


Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=247435 CO204_RS07805 WP_002264420.1 1538730..1539770(-) (sepM) [Streptococcus mutans strain LAR01]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=247435 CO204_RS07805 WP_002264420.1 1538730..1539770(-) (sepM) [Streptococcus mutans strain LAR01]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGCTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCCGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAACAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains


Predicted by InterproScan.

(131-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997


Multiple sequence alignment