Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CNO08_RS18530 Genome accession   NZ_CP023465
Coordinates   4627205..4627603 (-) Length   132 a.a.
NCBI ID   WP_036112825.1    Uniprot ID   A0A108UDA6
Organism   Lysobacter capsici strain KNU-14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4622205..4632603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CNO08_RS18515 (CNO08_18515) - 4624186..4626204 (-) 2019 WP_036112833.1 methyl-accepting chemotaxis protein -
  CNO08_RS18520 (CNO08_18520) - 4626260..4626811 (-) 552 WP_036112830.1 chemotaxis protein CheW -
  CNO08_RS18525 (CNO08_18525) - 4626820..4627185 (-) 366 WP_036112827.1 response regulator -
  CNO08_RS18530 (CNO08_18530) pilG 4627205..4627603 (-) 399 WP_036112825.1 twitching motility response regulator PilG Regulator
  CNO08_RS18535 (CNO08_18535) gshB 4627934..4628896 (+) 963 WP_096415381.1 glutathione synthase -
  CNO08_RS18540 (CNO08_18540) - 4628893..4629774 (+) 882 WP_046657730.1 energy transducer TonB -
  CNO08_RS18545 (CNO08_18545) - 4629875..4630153 (-) 279 WP_036112817.1 hypothetical protein -
  CNO08_RS18550 (CNO08_18550) - 4630196..4630711 (-) 516 WP_096415383.1 hypothetical protein -
  CNO08_RS18555 (CNO08_18555) tsaB 4630714..4631442 (-) 729 WP_096415385.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  CNO08_RS18560 (CNO08_18560) - 4631864..4632307 (-) 444 WP_198338883.1 VOC family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14824.25 Da        Isoelectric Point: 7.1362

>NTDB_id=247238 CNO08_RS18530 WP_036112825.1 4627205..4627603(-) (pilG) [Lysobacter capsici strain KNU-14]
MLDEVRSGSLDGLKVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=247238 CNO08_RS18530 WP_036112825.1 4627205..4627603(-) (pilG) [Lysobacter capsici strain KNU-14]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTGAAGGTCATGGTGATCGATGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAGCGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAAGCGTTGGCGAAGATCGCCG
ATCAGCAGCCACAGATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACCTGTGCGCTCATCAAGAAC
AATCAATTGTTCAAGAGCACGCCGGTCATCATGCTGTCTTCCAAGGACGGCCTGTTCGACAAGGCGCGTGGGCGCATCGT
CGGATCGGAGCAGTACCTGACCAAGCCATTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTTCACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A108UDA6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.939

0.705

Multiple sequence alignment