Detailed information NTG0247186

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: COO52_RS00370
• Genome accession: NZ_CP023448
• Coordinates: 63397..64710 (+)
• Length: 437 a.a.
• NCBI ID: WP_164966194.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HPJP26
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 58397..69710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
COO52_RS00350	crdR	58717..59358 (+)	642	WP_075711046.1	copper response regulator transcription factor CrdR	-
COO52_RS00355	crdS	59324..60526 (+)	1203	WP_096478433.1	copper-sensing histidine kinase CrdS	-
COO52_RS00360	-	60529..61923 (+)	1395	WP_096478434.1	NAD(P)H-hydrate dehydratase	-
COO52_RS00365	-	61934..63400 (+)	1467	WP_096478435.1	replicative DNA helicase	-
COO52_RS00370	comEC/comE3	63397..64710 (+)	1314	WP_164966194.1	ComEC/Rec2 family competence protein	Machinery gene
COO52_RS00375	mqnP	64781..65623 (+)	843	WP_232255053.1	menaquinone biosynthesis prenyltransferase MqnP	-
COO52_RS00380	-	65616..66110 (+)	495	WP_164966195.1	hypothetical protein	-
COO52_RS00385	-	66123..66626 (+)	504	WP_000953085.1	DUF6115 domain-containing protein	-
COO52_RS00390	-	66623..67426 (+)	804	WP_096478438.1	phosphatidylserine decarboxylase	-
COO52_RS00395	nadA	67416..68426 (+)	1011	WP_096478439.1	quinolinate synthase NadA	-
COO52_RS00400	nadC	68426..69247 (+)	822	WP_000404028.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50245.27 Da
• Isoelectric Point: 9.9107

>NTDB_id=247186 COO52_RS00370 WP_164966194.1 63397..64710(+) (comEC/comE3) [Helicobacter pylori strain HPJP26]
MKDKTFQGAFELLTTPKEYLLFGVILSLLLALNLYLEYLNYQKLDFSKPTDLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRHAQFFGKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHWRRFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLS
ALVFLNMLIVVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDGILNMPLTIPTISVFSPLWLLGVHLFLM
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=247186 COO52_RS00370 WP_164966194.1 63397..64710(+) (comEC/comE3) [Helicobacter pylori strain HPJP26]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATATTTGTTGTTTGGGGTTATTTTAAG
CCTTTTGTTAGCGCTTAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAGACCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
ATTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATT
GGCGCCGTTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTCCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGTCATAAGCTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATCGTTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTGGGTTTGGGGTCTTTGCTGGATGGTA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAATG
ATTCTAAGCGTGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCAGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.508	100	0.945