Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CCZ27_RS22325 Genome accession   NZ_CP023439
Coordinates   5119875..5120273 (-) Length   132 a.a.
NCBI ID   WP_096451950.1    Uniprot ID   -
Organism   Thauera sp. K11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5114875..5125273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ27_RS22310 (CCZ27_22310) - 5116743..5118860 (-) 2118 WP_096451944.1 methyl-accepting chemotaxis protein -
  CCZ27_RS22315 (CCZ27_22315) - 5118982..5119491 (-) 510 WP_096451946.1 chemotaxis protein CheW -
  CCZ27_RS22320 (CCZ27_22320) - 5119498..5119863 (-) 366 WP_096451948.1 response regulator -
  CCZ27_RS22325 (CCZ27_22325) pilG 5119875..5120273 (-) 399 WP_096451950.1 response regulator Regulator
  CCZ27_RS22330 (CCZ27_22330) - 5120350..5120520 (-) 171 WP_096452898.1 rubredoxin -
  CCZ27_RS22335 (CCZ27_22335) - 5120629..5121492 (+) 864 WP_198363227.1 PfkB family carbohydrate kinase -
  CCZ27_RS22340 (CCZ27_22340) thiE 5121485..5122129 (+) 645 WP_096451952.1 thiamine phosphate synthase -
  CCZ27_RS22345 (CCZ27_22345) hemL 5122245..5123528 (+) 1284 WP_096451955.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CCZ27_RS22350 (CCZ27_22350) - 5123560..5124957 (+) 1398 WP_096451957.1 histidine kinase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14436.71 Da        Isoelectric Point: 7.2443

>NTDB_id=247175 CCZ27_RS22325 WP_096451950.1 5119875..5120273(-) (pilG) [Thauera sp. K11]
MDLAGLKVMVIDDSNTIRRSAEIFLGQAGCQVLLAEDGFDALAKIADHHPDVVFVDIMMPRLDGYQTCALIKKNSRLSST
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLRAVATHAARAARLSPE

Nucleotide


Download         Length: 399 bp        

>NTDB_id=247175 CCZ27_RS22325 WP_096451950.1 5119875..5120273(-) (pilG) [Thauera sp. K11]
ATGGATCTTGCCGGACTCAAGGTGATGGTCATCGACGACAGCAACACCATCCGCCGCAGCGCCGAGATCTTTCTCGGCCA
GGCGGGCTGCCAGGTGCTGCTCGCCGAGGATGGTTTCGACGCACTGGCGAAGATCGCCGACCATCATCCCGACGTCGTCT
TCGTCGACATCATGATGCCGCGCCTCGACGGCTACCAGACCTGTGCGCTGATCAAGAAGAATTCGCGCCTGTCATCCACG
CCGGTGATCATGCTGTCGTCGAAGGACGGGCTCTTCGACCGCGCCCGCGGGCGCATGGTCGGATCGGACGAATACCTCAC
CAAACCCTTCACCAAGGACAGCCTGCTGCGCGCGGTGGCCACCCACGCCGCGCGCGCCGCGCGGCTGAGTCCGGAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.033

92.424

0.629

Multiple sequence alignment