Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   CLI98_RS16775 Genome accession   NZ_CP023431
Coordinates   3258254..3258718 (-) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain SCGB 574     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3253254..3263718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLI98_RS16750 (CLI98_03300) - 3253735..3255555 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  CLI98_RS16755 (CLI98_03301) - 3255580..3256749 (-) 1170 WP_007611083.1 aminotransferase A -
  CLI98_RS20025 (CLI98_03302) - 3256950..3257111 (-) 162 WP_007409608.1 hypothetical protein -
  CLI98_RS16770 (CLI98_03303) cheV 3257300..3258211 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  CLI98_RS16775 (CLI98_03304) kre 3258254..3258718 (-) 465 WP_014417605.1 YkyB family protein Regulator
  CLI98_RS16780 (CLI98_03305) - 3258841..3260133 (-) 1293 WP_014417606.1 MFS transporter -
  CLI98_RS16785 (CLI98_03306) - 3260209..3260703 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  CLI98_RS16790 (CLI98_03307) - 3260778..3261641 (-) 864 WP_022553417.1 metallophosphoesterase -
  CLI98_RS16795 (CLI98_03308) fadH 3261785..3262549 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  CLI98_RS16800 (CLI98_03309) - 3262663..3263220 (+) 558 WP_022553416.1 hypothetical protein -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=247102 CLI98_RS16775 WP_014417605.1 3258254..3258718(-) (kre) [Bacillus velezensis strain SCGB 574]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=247102 CLI98_RS16775 WP_014417605.1 3258254..3258718(-) (kre) [Bacillus velezensis strain SCGB 574]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains


Predicted by InterproScan.

(13-127)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929


Multiple sequence alignment