Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CLI98_RS15465 Genome accession   NZ_CP023431
Coordinates   3026002..3026658 (+) Length   218 a.a.
NCBI ID   WP_038461347.1    Uniprot ID   -
Organism   Bacillus velezensis strain SCGB 574     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3021002..3031658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLI98_RS15440 (CLI98_03037) oppF 3021532..3022449 (+) 918 WP_014417419.1 oligopeptide ABC transporter ATP-binding protein OppF -
  CLI98_RS15445 (CLI98_03038) - 3022556..3023743 (+) 1188 WP_022553557.1 putative glycoside hydrolase -
  CLI98_RS15450 (CLI98_03039) - 3023861..3024439 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  CLI98_RS15455 (CLI98_03040) spx 3024618..3025013 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  CLI98_RS15460 (CLI98_03041) - 3025070..3025726 (-) 657 WP_014417421.1 TerC family protein -
  CLI98_RS15465 (CLI98_03042) mecA 3026002..3026658 (+) 657 WP_038461347.1 adaptor protein MecA Regulator
  CLI98_RS15470 (CLI98_03043) - 3026809..3027969 (+) 1161 WP_022553555.1 competence protein CoiA family protein -
  CLI98_RS15475 (CLI98_03044) pepF 3028197..3030026 (+) 1830 WP_096145021.1 oligoendopeptidase F Regulator
  CLI98_RS19995 (CLI98_03045) - 3030064..3030231 (-) 168 WP_003155026.1 hypothetical protein -
  CLI98_RS15485 (CLI98_03046) spxH 3030518..3031420 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25978.78 Da        Isoelectric Point: 4.1179

>NTDB_id=247098 CLI98_RS15465 WP_038461347.1 3026002..3026658(+) (mecA) [Bacillus velezensis strain SCGB 574]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=247098 CLI98_RS15465 WP_038461347.1 3026002..3026658(+) (mecA) [Bacillus velezensis strain SCGB 574]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGAAGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899

Multiple sequence alignment