Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CGZ65_RS09275 Genome accession   NZ_CP023429
Coordinates   1811901..1812428 (+) Length   175 a.a.
NCBI ID   WP_096295618.1    Uniprot ID   -
Organism   Neisseria weixii strain 10022     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1806901..1817428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ65_RS09255 (CGZ65_09255) pncB 1807508..1808731 (+) 1224 WP_096295616.1 nicotinate phosphoribosyltransferase -
  CGZ65_RS09260 (CGZ65_09260) - 1808765..1809414 (-) 650 Protein_1886 IS1595 family transposase -
  CGZ65_RS09265 (CGZ65_09265) - 1809526..1810788 (-) 1263 WP_096295617.1 Glu/Leu/Phe/Val family dehydrogenase -
  CGZ65_RS09270 (CGZ65_09270) - 1811170..1811889 (+) 720 WP_096296158.1 phosphoglycolate phosphatase -
  CGZ65_RS09275 (CGZ65_09275) recX 1811901..1812428 (+) 528 WP_096295618.1 recombination regulator RecX Regulator
  CGZ65_RS13440 (CGZ65_09280) - 1812570..1812737 (+) 168 WP_096295619.1 hypothetical protein -
  CGZ65_RS09285 (CGZ65_09285) - 1812813..1814168 (-) 1356 WP_096295620.1 PFL family protein -
  CGZ65_RS09290 (CGZ65_09290) - 1814183..1814455 (-) 273 WP_095502667.1 ACT domain-containing protein -
  CGZ65_RS09295 (CGZ65_09295) alr 1814669..1815726 (-) 1058 Protein_1893 alanine racemase -
  CGZ65_RS09300 (CGZ65_09300) - 1816061..1817314 (-) 1254 WP_096295621.1 D-amino acid dehydrogenase -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 20140.62 Da        Isoelectric Point: 7.4018

>NTDB_id=247026 CGZ65_RS09275 WP_096295618.1 1811901..1812428(+) (recX) [Neisseria weixii strain 10022]
MYESESNGFIHFGDADGQPKRSGKPQKSLRARAMDILSRQEISRVGLKRKLAPHAESEEELEKVLDEFAERNWQSDERYT
EAYIHSKSRQHGKLRLQQALAQQGIDTDISRELMPDKESELQTAIQVLRKKFKQPAGGDLKEKQKQVRFLAYRGFDMGTI
QAALKSDWSADDEFL

Nucleotide


Download         Length: 528 bp        

>NTDB_id=247026 CGZ65_RS09275 WP_096295618.1 1811901..1812428(+) (recX) [Neisseria weixii strain 10022]
ATGTACGAGTCCGAAAGCAACGGCTTTATCCACTTTGGCGATGCTGATGGCCAACCCAAACGCTCGGGCAAACCGCAAAA
ATCTTTGCGGGCGCGCGCTATGGATATTTTATCGCGCCAAGAAATCAGCCGTGTCGGACTGAAGCGCAAGCTCGCGCCGC
ATGCCGAGAGCGAGGAAGAATTGGAAAAAGTGTTGGATGAATTTGCCGAACGCAATTGGCAATCGGACGAGCGCTACACT
GAAGCCTACATCCACAGCAAAAGCCGCCAACACGGCAAATTGCGCTTACAACAGGCTTTGGCGCAACAAGGCATTGATAC
CGACATCAGCCGTGAATTAATGCCTGATAAAGAAAGCGAGCTGCAAACCGCGATTCAGGTTTTACGCAAAAAATTCAAGC
AGCCGGCAGGCGGCGATTTAAAAGAAAAACAAAAACAGGTGCGCTTTCTCGCCTACCGCGGTTTCGACATGGGCACAATT
CAAGCGGCCTTAAAAAGCGATTGGTCAGCAGATGATGAATTTTTATAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(52-166)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

78.621

82.857

0.651

Multiple sequence alignment