Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CMR26_RS16670 | Genome accession | NZ_CP023414 |
| Coordinates | 3357497..3357787 (+) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain BS-37 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3352497..3362787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CMR26_RS16655 (CMR26_16675) | - | 3352719..3354044 (-) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
| CMR26_RS16660 (CMR26_16680) | - | 3354179..3354946 (-) | 768 | WP_042635683.1 | TatD family hydrolase | - |
| CMR26_RS16665 (CMR26_16685) | metG | 3355022..3357013 (-) | 1992 | WP_042635682.1 | methionine--tRNA ligase | - |
| CMR26_RS16670 (CMR26_16690) | abrB | 3357497..3357787 (+) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CMR26_RS16675 (CMR26_16695) | rsmI | 3357837..3358718 (-) | 882 | WP_020953847.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CMR26_RS16680 (CMR26_16700) | - | 3358693..3358992 (-) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| CMR26_RS16685 (CMR26_16705) | - | 3358979..3359722 (-) | 744 | WP_015239018.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CMR26_RS16690 (CMR26_16710) | yabA | 3359783..3360142 (-) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| CMR26_RS16695 (CMR26_16715) | ricT | 3360157..3360984 (-) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| CMR26_RS16700 (CMR26_16720) | holB | 3360987..3361976 (-) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| CMR26_RS16705 (CMR26_16725) | - | 3361988..3362428 (-) | 441 | WP_004264730.1 | YaaR family protein | - |
| CMR26_RS16710 (CMR26_16730) | darA | 3362441..3362770 (-) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=246911 CMR26_RS16670 WP_169510469.1 3357497..3357787(+) (abrB) [Bacillus velezensis strain BS-37]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=246911 CMR26_RS16670 WP_169510469.1 3357497..3357787(+) (abrB) [Bacillus velezensis strain BS-37]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |