Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CMR26_RS12585 Genome accession   NZ_CP023414
Coordinates   2545794..2546585 (-) Length   263 a.a.
NCBI ID   WP_012117114.1    Uniprot ID   -
Organism   Bacillus velezensis strain BS-37     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2540794..2551585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS12545 (CMR26_12575) - 2541066..2541401 (-) 336 WP_007408558.1 SdpI family protein -
  CMR26_RS12550 (CMR26_12580) - 2541487..2542014 (-) 528 WP_108725087.1 SH3 domain-containing protein -
  CMR26_RS12555 (CMR26_12585) - 2542142..2542411 (-) 270 WP_003155492.1 YfhJ family protein -
  CMR26_RS12560 (CMR26_12590) - 2542535..2542687 (+) 153 WP_003155495.1 small, acid-soluble spore protein K -
  CMR26_RS12565 (CMR26_12595) - 2542832..2543743 (+) 912 WP_108725088.1 trypsin-like serine peptidase -
  CMR26_RS12570 (CMR26_12600) - 2543706..2544095 (+) 390 WP_032867737.1 DUF2606 family protein -
  CMR26_RS12575 (CMR26_12605) - 2544135..2545328 (-) 1194 WP_108725304.1 MFS transporter -
  CMR26_RS12580 (CMR26_12610) - 2545473..2545787 (-) 315 WP_007408553.1 YfhH family protein -
  CMR26_RS12585 (CMR26_12615) recX 2545794..2546585 (-) 792 WP_012117114.1 recombination regulator RecX Regulator
  CMR26_RS12590 (CMR26_12620) - 2546677..2547576 (+) 900 WP_108725089.1 TIGR01777 family oxidoreductase -
  CMR26_RS12595 (CMR26_12625) - 2547634..2547744 (+) 111 WP_003155504.1 YfhE family protein -
  CMR26_RS12600 (CMR26_12630) - 2547815..2548006 (+) 192 WP_003155508.1 YfhD family protein -
  CMR26_RS12605 (CMR26_12635) - 2548045..2548629 (-) 585 WP_007408549.1 nitroreductase -
  CMR26_RS12610 (CMR26_12640) - 2548706..2549590 (-) 885 WP_108725090.1 PhzF family phenazine biosynthesis isomerase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31004.21 Da        Isoelectric Point: 6.0921

>NTDB_id=246901 CMR26_RS12585 WP_012117114.1 2545794..2546585(-) (recX) [Bacillus velezensis strain BS-37]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=246901 CMR26_RS12585 WP_012117114.1 2545794..2546585(-) (recX) [Bacillus velezensis strain BS-37]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGATGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCTTACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACGCCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCTTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.468

100

0.795

Multiple sequence alignment