Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CMR26_RS11125 Genome accession   NZ_CP023414
Coordinates   2282306..2282497 (-) Length   63 a.a.
NCBI ID   WP_007409124.1    Uniprot ID   -
Organism   Bacillus velezensis strain BS-37     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2277306..2287497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS11100 (CMR26_11125) - 2277665..2278651 (-) 987 WP_007409119.1 ABC transporter ATP-binding protein -
  CMR26_RS11105 (CMR26_11130) - 2278825..2279610 (-) 786 WP_020955630.1 DUF2268 domain-containing protein -
  CMR26_RS11110 (CMR26_11135) fabF 2279693..2280931 (-) 1239 WP_108725050.1 beta-ketoacyl-ACP synthase II -
  CMR26_RS11115 (CMR26_11140) - 2280954..2281892 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CMR26_RS11120 (CMR26_11145) - 2282059..2282277 (+) 219 WP_007409123.1 hypothetical protein -
  CMR26_RS11125 (CMR26_11150) comZ 2282306..2282497 (-) 192 WP_007409124.1 ComZ family protein Regulator
  CMR26_RS11130 (CMR26_11155) med 2282510..2283463 (-) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  CMR26_RS11135 (CMR26_11160) - 2283553..2284119 (-) 567 WP_007409126.1 hypothetical protein -
  CMR26_RS11140 (CMR26_11165) - 2284202..2284936 (-) 735 WP_007409127.1 hypothetical protein -
  CMR26_RS11150 (CMR26_11175) - 2285197..2285382 (+) 186 WP_007409129.1 YjzD family protein -
  CMR26_RS11155 (CMR26_11180) - 2285419..2285598 (-) 180 WP_003155070.1 YjzC family protein -
  CMR26_RS11160 (CMR26_11185) argF 2285674..2286645 (-) 972 WP_007409130.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7185.30 Da        Isoelectric Point: 4.2259

>NTDB_id=246892 CMR26_RS11125 WP_007409124.1 2282306..2282497(-) (comZ) [Bacillus velezensis strain BS-37]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSLEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=246892 CMR26_RS11125 WP_007409124.1 2282306..2282497(-) (comZ) [Bacillus velezensis strain BS-37]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTTTGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778

Multiple sequence alignment