Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CMR26_RS09745 Genome accession   NZ_CP023414
Coordinates   2031001..2031465 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain BS-37     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2026001..2036465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS09720 (CMR26_09730) - 2026507..2027055 (-) 549 WP_007409614.1 hypothetical protein -
  CMR26_RS09725 (CMR26_09735) fadH 2027169..2027933 (-) 765 WP_007409613.1 2,4-dienoyl-CoA reductase -
  CMR26_RS09730 (CMR26_09740) - 2028078..2028941 (+) 864 WP_007409612.1 metallophosphoesterase -
  CMR26_RS09735 (CMR26_09745) - 2029016..2029510 (+) 495 WP_095284082.1 L,D-transpeptidase family protein -
  CMR26_RS09740 (CMR26_09750) - 2029586..2030878 (+) 1293 WP_108724999.1 MFS transporter -
  CMR26_RS09745 (CMR26_09755) kre 2031001..2031465 (+) 465 WP_003154622.1 YkyB family protein Regulator
  CMR26_RS09750 (CMR26_09760) cheV 2031508..2032419 (-) 912 WP_007409609.1 chemotaxis protein CheV -
  CMR26_RS20175 (CMR26_09770) - 2032608..2032769 (+) 162 WP_007409608.1 hypothetical protein -
  CMR26_RS09760 (CMR26_09775) - 2032970..2034183 (+) 1214 Protein_1900 aminotransferase A -
  CMR26_RS09765 (CMR26_09780) - 2034164..2035984 (-) 1821 WP_108725000.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=246885 CMR26_RS09745 WP_003154622.1 2031001..2031465(+) (kre) [Bacillus velezensis strain BS-37]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=246885 CMR26_RS09745 WP_003154622.1 2031001..2031465(+) (kre) [Bacillus velezensis strain BS-37]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment