Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CMR26_RS09645 Genome accession   NZ_CP023414
Coordinates   2015003..2015599 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain BS-37     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2010003..2020599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS09620 (CMR26_09630) mobB 2010379..2010900 (-) 522 WP_032868152.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  CMR26_RS09625 (CMR26_09635) glp 2010861..2012153 (-) 1293 WP_059367088.1 gephyrin-like molybdotransferase Glp -
  CMR26_RS09630 (CMR26_09640) - 2012171..2013190 (-) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  CMR26_RS09635 (CMR26_09645) - 2013242..2013844 (-) 603 WP_042635153.1 molybdenum cofactor guanylyltransferase -
  CMR26_RS09640 (CMR26_09650) - 2013990..2014982 (+) 993 WP_007409627.1 hypothetical protein -
  CMR26_RS09645 (CMR26_09655) rok 2015003..2015599 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  CMR26_RS09650 (CMR26_09660) - 2016050..2016508 (-) 459 WP_012117446.1 TlpA disulfide reductase family protein -
  CMR26_RS09655 (CMR26_09665) - 2016797..2017603 (+) 807 WP_108724997.1 mechanosensitive ion channel family protein -
  CMR26_RS09660 (CMR26_09670) - 2017637..2017882 (-) 246 WP_003154596.1 YkuS family protein -
  CMR26_RS09665 (CMR26_09675) - 2017943..2019067 (-) 1125 WP_007409624.1 N-acetyldiaminopimelate deacetylase -
  CMR26_RS09670 (CMR26_09680) dapD 2019138..2019848 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CMR26_RS09675 (CMR26_09685) - 2019930..2020385 (-) 456 WP_038463794.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=246884 CMR26_RS09645 WP_003154591.1 2015003..2015599(-) (rok) [Bacillus velezensis strain BS-37]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=246884 CMR26_RS09645 WP_003154591.1 2015003..2015599(-) (rok) [Bacillus velezensis strain BS-37]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGTGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment