Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   Bateq7PJ16_RS15130 Genome accession   NZ_CP023409
Coordinates   2788126..2788872 (-) Length   248 a.a.
NCBI ID   WP_159376980.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2783126..2793872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS15105 (Bateq7PJ16_3001) mreC 2783532..2784404 (-) 873 WP_003222609.1 rod shape-determining protein MreC -
  Bateq7PJ16_RS15110 (Bateq7PJ16_3002) mreB 2784435..2785448 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  Bateq7PJ16_RS15115 (Bateq7PJ16_3003) radC 2785540..2786235 (-) 696 WP_021480240.1 DNA repair protein RadC -
  Bateq7PJ16_RS15120 (Bateq7PJ16_3004) maf 2786272..2786841 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  Bateq7PJ16_RS15125 (Bateq7PJ16_3005) spoIIB 2786994..2787992 (-) 999 WP_021480241.1 stage II sporulation protein SpoIIB -
  Bateq7PJ16_RS15130 (Bateq7PJ16_3006) comC 2788126..2788872 (-) 747 WP_159376980.1 A24 family peptidase Machinery gene
  Bateq7PJ16_RS15135 (Bateq7PJ16_3007) folC 2789014..2790306 (-) 1293 WP_043856952.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  Bateq7PJ16_RS15140 (Bateq7PJ16_3008) valS 2790366..2793008 (-) 2643 WP_159377213.1 valine--tRNA ligase -
  Bateq7PJ16_RS15145 (Bateq7PJ16_3009) - 2793456..2793647 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26499.08 Da        Isoelectric Point: 9.7433

>NTDB_id=246811 Bateq7PJ16_RS15130 WP_159376980.1 2788126..2788872(-) (comC) [Bacillus subtilis strain 7PJ-16]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLIYPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=246811 Bateq7PJ16_RS15130 WP_159376980.1 2788126..2788872(-) (comC) [Bacillus subtilis strain 7PJ-16]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCACGTCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTATCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTATTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCCGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTTGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Type IV leader peptidase family (Peptidase_A24)

(101-203)

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.194

100

0.992

Multiple sequence alignment