Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   Bateq7PJ16_RS14345 Genome accession   NZ_CP023409
Coordinates   2647696..2648106 (-) Length   136 a.a.
NCBI ID   WP_009967785.1    Uniprot ID   A0A6I4D881
Organism   Bacillus subtilis strain 7PJ-16     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2642696..2653106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS14315 (Bateq7PJ16_2840) - 2642782..2642922 (+) 141 WP_003226124.1 sporulation histidine kinase inhibitor Sda -
  Bateq7PJ16_RS14320 (Bateq7PJ16_2841) yqeF 2643228..2643959 (-) 732 WP_003229964.1 SGNH/GDSL hydrolase family protein -
  Bateq7PJ16_RS14325 (Bateq7PJ16_2843) cwlH 2644211..2644963 (-) 753 WP_021480067.1 N-acetylmuramoyl-L-alanine amidase CwlH -
  Bateq7PJ16_RS14330 (Bateq7PJ16_2844) yqeD 2645150..2645776 (+) 627 WP_159376965.1 TVP38/TMEM64 family protein -
  Bateq7PJ16_RS14335 (Bateq7PJ16_2845) gnd 2645796..2646689 (-) 894 WP_046160611.1 phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) -
  Bateq7PJ16_RS14340 (Bateq7PJ16_2846) yqeB 2646941..2647663 (+) 723 WP_014480321.1 hypothetical protein -
  Bateq7PJ16_RS14345 (Bateq7PJ16_2847) nucA/comI 2647696..2648106 (-) 411 WP_009967785.1 sporulation-specific Dnase NucB Machinery gene
  Bateq7PJ16_RS14350 (Bateq7PJ16_2849) sigK 2648302..2649030 (+) 729 WP_013308023.1 RNA polymerase sporulation sigma factor SigK -
  Bateq7PJ16_RS14355 (Bateq7PJ16_2850) - 2649030..2649146 (+) 117 WP_041850087.1 hypothetical protein -
  Bateq7PJ16_RS14360 - 2649112..2649309 (-) 198 Protein_2809 recombinase family protein -
  Bateq7PJ16_RS22675 - 2649267..2649445 (-) 179 Protein_2810 hypothetical protein -
  Bateq7PJ16_RS14365 (Bateq7PJ16_2851) psiE 2649986..2650402 (-) 417 WP_003246154.1 phosphate-starvation-inducible protein PsiE -
  Bateq7PJ16_RS14370 (Bateq7PJ16_2852) yrkQ 2650448..2651746 (-) 1299 WP_049141120.1 two-component system sensor histidine kinase YrkQ -
  Bateq7PJ16_RS14375 (Bateq7PJ16_2853) yrkP 2651733..2652428 (-) 696 WP_021480140.1 two-component response regulator YrkP -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14967.97 Da        Isoelectric Point: 5.1853

>NTDB_id=246807 Bateq7PJ16_RS14345 WP_009967785.1 2647696..2648106(-) (nucA/comI) [Bacillus subtilis strain 7PJ-16]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ

Nucleotide


Download         Length: 411 bp        

>NTDB_id=246807 Bateq7PJ16_RS14345 WP_009967785.1 2647696..2648106(-) (nucA/comI) [Bacillus subtilis strain 7PJ-16]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(40-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I4D881

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

62.609

84.559

0.529

Multiple sequence alignment