Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   Bateq7PJ16_RS14255 Genome accession   NZ_CP023409
Coordinates   2632851..2635181 (-) Length   776 a.a.
NCBI ID   WP_159376963.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2627851..2640181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS14220 (Bateq7PJ16_2822) yqxA 2628188..2628526 (-) 339 WP_032726189.1 YqxA family protein -
  Bateq7PJ16_RS14225 (Bateq7PJ16_2823) spoIIP 2628543..2629748 (-) 1206 WP_014477383.1 spore autolysin SpoIIP -
  Bateq7PJ16_RS14230 (Bateq7PJ16_2824) gpr 2629811..2630917 (-) 1107 WP_014480309.1 GPR endopeptidase -
  Bateq7PJ16_RS14235 (Bateq7PJ16_2825) rpsT 2631121..2631387 (+) 267 WP_003229989.1 30S ribosomal protein S20 -
  Bateq7PJ16_RS14240 (Bateq7PJ16_2826) holA 2631402..2632445 (-) 1044 WP_159376962.1 DNA polymerase III subunit delta -
  Bateq7PJ16_RS14245 - 2632485..2632598 (-) 114 WP_134975484.1 hypothetical protein -
  Bateq7PJ16_RS14250 (Bateq7PJ16_2827) yqzM 2632675..2632809 (+) 135 WP_003229983.1 YqzM family protein -
  Bateq7PJ16_RS14255 (Bateq7PJ16_2828) comEC 2632851..2635181 (-) 2331 WP_159376963.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Bateq7PJ16_RS14260 (Bateq7PJ16_2829) comEB 2635185..2635754 (-) 570 WP_003229978.1 ComE operon protein 2 -
  Bateq7PJ16_RS14265 (Bateq7PJ16_2830) comEA 2635821..2636438 (-) 618 WP_032726193.1 competence protein ComEA Machinery gene
  Bateq7PJ16_RS14270 (Bateq7PJ16_2831) comER 2636522..2637343 (+) 822 WP_159376964.1 late competence protein ComER -
  Bateq7PJ16_RS14275 (Bateq7PJ16_2832) yqeM 2637409..2638152 (-) 744 WP_032726197.1 class I SAM-dependent methyltransferase -
  Bateq7PJ16_RS14280 (Bateq7PJ16_2833) rsfS 2638149..2638505 (-) 357 WP_014480315.1 ribosome silencing factor -
  Bateq7PJ16_RS14285 (Bateq7PJ16_2834) yqeK 2638523..2639083 (-) 561 WP_014480316.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Bateq7PJ16_RS14290 (Bateq7PJ16_2835) nadD 2639073..2639642 (-) 570 WP_004398676.1 nicotinate-nucleotide adenylyltransferase -
  Bateq7PJ16_RS14295 (Bateq7PJ16_2836) yhbY 2639654..2639944 (-) 291 WP_003226133.1 ribosome assembly RNA-binding protein YhbY -

Sequence

Protein


Download         Length: 776 a.a.        Molecular weight: 86609.13 Da        Isoelectric Point: 7.2641

>NTDB_id=246804 Bateq7PJ16_RS14255 WP_159376963.1 2632851..2635181(-) (comEC) [Bacillus subtilis strain 7PJ-16]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIMLIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIIIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMAGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLVSWTNRLITNIADVDVFTIMIAHPAPALLFLFTVTIILLLMAIEKRSLSQSMVTGG
ICCAVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKMLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=246804 Bateq7PJ16_RS14255 WP_159376963.1 2632851..2635181(-) (comEC) [Bacillus subtilis strain 7PJ-16]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATGTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGTGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGTGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATAATCCGTCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGGCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGGTAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGCTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTCGATGGTAACCGGAGGC
ATTTGCTGCGCGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGATGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAACGTGTTTCCGAATATAAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAAATATTACAAAGGCATTCTATCCGTGTGCTGCGTACAGATCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(507-718)

Competence protein (Competence)

(208-469)

Domain of unknown function (DUF4131) (DUF4131)

(19-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

97.68

100

0.977

Multiple sequence alignment