Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   Bateq7PJ16_RS06620 Genome accession   NZ_CP023409
Coordinates   1277442..1278563 (+) Length   373 a.a.
NCBI ID   WP_231834299.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1272442..1283563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS06585 (Bateq7PJ16_1276) yjbB 1273080..1274297 (+) 1218 WP_124048307.1 MFS transporter -
  Bateq7PJ16_RS06590 (Bateq7PJ16_1277) yjbC 1274462..1275040 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  Bateq7PJ16_RS06595 (Bateq7PJ16_1278) spx 1275221..1275616 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  Bateq7PJ16_RS06600 (Bateq7PJ16_1279) yjbE 1275662..1276318 (-) 657 WP_128740217.1 TerC family protein -
  Bateq7PJ16_RS06605 - 1276488..1276628 (+) 141 WP_119122854.1 hypothetical protein -
  Bateq7PJ16_RS06610 (Bateq7PJ16_1280) mecA 1276595..1277251 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  Bateq7PJ16_RS06615 (Bateq7PJ16_1281) - 1277246..1277368 (-) 123 WP_021479547.1 hypothetical protein -
  Bateq7PJ16_RS06620 (Bateq7PJ16_1282) coiA 1277442..1278563 (+) 1122 WP_231834299.1 competence protein CoiA Machinery gene
  Bateq7PJ16_RS06625 (Bateq7PJ16_1283) pepF 1278793..1280622 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  Bateq7PJ16_RS06630 (Bateq7PJ16_1284) - 1280660..1280827 (-) 168 WP_003244944.1 hypothetical protein -
  Bateq7PJ16_RS06635 (Bateq7PJ16_1286) spxH 1281142..1282041 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  Bateq7PJ16_RS06640 (Bateq7PJ16_1287) bhbI 1282038..1282436 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  Bateq7PJ16_RS06645 (Bateq7PJ16_1288) cwlQ 1282691..1283425 (-) 735 WP_250622474.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43825.81 Da        Isoelectric Point: 9.9774

>NTDB_id=246780 Bateq7PJ16_RS06620 WP_231834299.1 1277442..1278563(+) (coiA) [Bacillus subtilis strain 7PJ-16]
MFHLLGAQQNQKLKQRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSFQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIYNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=246780 Bateq7PJ16_RS06620 WP_231834299.1 1277442..1278563(+) (coiA) [Bacillus subtilis strain 7PJ-16]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCAGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAATCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATTAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCATTTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACACCTTTTTCATTTCTGCCAACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTTATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.123

100

0.981


Multiple sequence alignment