Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   Bateq7PJ16_RS06495 Genome accession   NZ_CP023409
Coordinates   1254148..1255101 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain 7PJ-16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1249148..1260101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS06470 (Bateq7PJ16_1251) argF 1250980..1251939 (+) 960 WP_124048303.1 ornithine carbamoyltransferase -
  Bateq7PJ16_RS06475 (Bateq7PJ16_1252) yjzC 1252025..1252204 (+) 180 WP_003245356.1 YjzC family protein -
  Bateq7PJ16_RS06480 yjzD 1252250..1252435 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  Bateq7PJ16_RS06485 (Bateq7PJ16_1254) - 1252684..1253418 (+) 735 WP_032721340.1 hypothetical protein -
  Bateq7PJ16_RS06490 (Bateq7PJ16_1256) - 1253500..1254057 (+) 558 WP_014476424.1 hypothetical protein -
  Bateq7PJ16_RS06495 (Bateq7PJ16_1257) med 1254148..1255101 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  Bateq7PJ16_RS06500 (Bateq7PJ16_1258) comZ 1255116..1255307 (+) 192 WP_038828822.1 ComG operon transcriptional repressor ComZ Regulator
  Bateq7PJ16_RS06505 (Bateq7PJ16_1259) yjzB 1255337..1255582 (-) 246 WP_124048399.1 spore coat protein YjzB -
  Bateq7PJ16_RS06510 (Bateq7PJ16_1260) fabH 1255747..1256685 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  Bateq7PJ16_RS06515 (Bateq7PJ16_1261) fabF 1256708..1257949 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  Bateq7PJ16_RS06520 (Bateq7PJ16_1262) yjaZ 1258025..1258810 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  Bateq7PJ16_RS06525 (Bateq7PJ16_1263) appD 1259002..1259988 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=246775 Bateq7PJ16_RS06495 WP_014476425.1 1254148..1255101(+) (med) [Bacillus subtilis strain 7PJ-16]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=246775 Bateq7PJ16_RS06495 WP_014476425.1 1254148..1255101(+) (med) [Bacillus subtilis strain 7PJ-16]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGTTGCCAAAAAACGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997


Multiple sequence alignment