Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   Bateq7PJ16_RS04965 Genome accession   NZ_CP023409
Coordinates   972249..973043 (+) Length   264 a.a.
NCBI ID   WP_021481166.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 967249..978043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS04935 (Bateq7PJ16_0957) sxzA 968088..969119 (+) 1032 WP_159376722.1 iron ABC transporter permease -
  Bateq7PJ16_RS04940 (Bateq7PJ16_0958) yfhB 969234..970115 (+) 882 WP_159376723.1 PhzF family phenazine biosynthesis isomerase -
  Bateq7PJ16_RS04945 (Bateq7PJ16_0959) yfhC 970203..970787 (+) 585 WP_003243940.1 nitroreductase -
  Bateq7PJ16_RS04950 (Bateq7PJ16_0960) yfhD 970826..971017 (-) 192 WP_003233561.1 YfhD family protein -
  Bateq7PJ16_RS04955 (Bateq7PJ16_0961) yfhE 971084..971194 (-) 111 WP_003223230.1 YfhE family protein -
  Bateq7PJ16_RS04960 (Bateq7PJ16_0962) yfhF 971249..972160 (-) 912 WP_103803364.1 TIGR01777 family oxidoreductase -
  Bateq7PJ16_RS04965 (Bateq7PJ16_0963) recX 972249..973043 (+) 795 WP_021481166.1 recombination regulator RecX Regulator
  Bateq7PJ16_RS04970 (Bateq7PJ16_0964) yfhH 973045..973359 (+) 315 WP_049140592.1 YfhH family protein -
  Bateq7PJ16_RS04975 (Bateq7PJ16_0965) yfhI 973502..974695 (+) 1194 WP_003243500.1 MFS transporter -
  Bateq7PJ16_RS04980 (Bateq7PJ16_0966) sspK 974727..974879 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  Bateq7PJ16_RS04985 (Bateq7PJ16_0967) yfhJ 975004..975273 (+) 270 WP_003243789.1 YfhJ family protein -
  Bateq7PJ16_RS04990 (Bateq7PJ16_0968) yfhK 975418..975936 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  Bateq7PJ16_RS04995 (Bateq7PJ16_0969) spdL 976021..976353 (+) 333 WP_049140590.1 SdpC immunity protein SpdL -
  Bateq7PJ16_RS05000 (Bateq7PJ16_0970) ephM 976340..977200 (+) 861 WP_087614456.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31025.29 Da        Isoelectric Point: 6.6686

>NTDB_id=246767 Bateq7PJ16_RS04965 WP_021481166.1 972249..973043(+) (recX) [Bacillus subtilis strain 7PJ-16]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=246767 Bateq7PJ16_RS04965 WP_021481166.1 972249..973043(+) (recX) [Bacillus subtilis strain 7PJ-16]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996


Multiple sequence alignment